Gene
RNA
| Item | Value |
|---|---|
| gene id | G1302181 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 49416419 ~ 49416658 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1485640 | True | 240 | lncRNA | 0.49 | 1 | 49416419 | 49416658 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110490225 | NA | coding | downstream | 40576 | 49372284 ~ 49375843 (-) |
| LOC110490224 | LOC106609251 | coding | downstream | 44493 | 49315673 ~ 49371926 (-) |
| LOC110490222 | LOC106576046 | coding | downstream | 110724 | 49264705 ~ 49305695 (-) |
| LOC110490221 | timp3 | coding | downstream | 220747 | 49177182 ~ 49195672 (-) |
| LOC118938810 | LOC106576042 | coding | downstream | 397576 | 49013740 ~ 49018843 (-) |
| LOC110490847 | LOC106576105 | coding | upstream | 27951 | 49444609 ~ 49446782 (-) |
| LOC110490229 | LOC106576106 | coding | upstream | 69658 | 49486316 ~ 49488678 (-) |
| LOC110490230 | LOC106609249 | coding | upstream | 80003 | 49496661 ~ 49513418 (-) |
| LOC110490232 | LOC106576049 | coding | upstream | 192560 | 49608361 ~ 49612631 (-) |
| LOC118938922 | NA | coding | upstream | 197278 | 49613936 ~ 49614562 (-) |
| G1302178 | NA | non-coding | downstream | 1119 | 49414933 ~ 49415300 (-) |
| G1302166 | NA | non-coding | downstream | 33484 | 49382666 ~ 49382935 (-) |
| G1302159 | NA | non-coding | downstream | 38800 | 49375971 ~ 49377619 (-) |
| G1302151 | NA | non-coding | downstream | 56835 | 49359377 ~ 49359584 (-) |
| G1302146 | NA | non-coding | downstream | 65385 | 49350806 ~ 49351034 (-) |
| G1302191 | NA | non-coding | upstream | 20004 | 49436662 ~ 49436864 (-) |
| G1302313 | NA | non-coding | upstream | 123590 | 49540248 ~ 49540456 (-) |
| G1302362 | NA | non-coding | upstream | 171139 | 49587797 ~ 49588005 (-) |
| G1302380 | NA | non-coding | upstream | 183664 | 49600322 ~ 49600907 (-) |
| G1302564 | NA | non-coding | upstream | 184975 | 49601633 ~ 49601838 (-) |
| si:dkeyp-27e10.3 | LOC106576037 | other | downstream | 577268 | 48822973 ~ 48839311 (-) |
| celsr1a | LOC106576003 | other | downstream | 1712381 | 47584674 ~ 47707520 (-) |
| tbc1d22a | tbc1d22a | other | downstream | 2196804 | 47217532 ~ 47405004 (-) |
| tafa5a | fam19a5 | other | downstream | 2462995 | 46822067 ~ 46995100 (-) |
| G1298541 | LOC106575995 | other | downstream | 3118467 | 46295361 ~ 46297952 (-) |
| G1302602 | NA | other | upstream | 247293 | 49663951 ~ 49664296 (-) |
| LOC110490244 | LOC106609225 | other | upstream | 882806 | 50290050 ~ 50301082 (-) |
| LOC110490264 | LOC106576080 | other | upstream | 1782571 | 51199223 ~ 51205927 (-) |
| LOC110490744 | LOC106576129 | other | upstream | 2369973 | 51785488 ~ 51793354 (-) |
| G1304896 | LOC107662719 | other | upstream | 2504837 | 51921495 ~ 51922528 (-) |
