G1301727


Basic Information

Item Value
gene id G1301727
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 49430806 ~ 49431122 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1485141
ggccgaaaacatagaaatgccccaaaacatagaaaaacaaacatagactgcccacccaactcacgccctgaccatactaaataaatacaaaacaacggaaatagaggtcagaacgtgacagtacccccccccaaaggtgcggactccggccgcaaaaccttgacctataggggagggtctgggtgggcgtctgtccgcggtggcggctctggcgcgggacgcggaccccacttcaccattgtcttagtccgccttattgtccgcctccgtggcttactcaccatgcccacccctctcaatgaccccactggacagag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1485141 True 317 lncRNA 0.56 1 49430806 49431122

Neighbor

gene id symbol gene type direction distance location
LOC110490228 NA coding upstream 20608 49398275 ~ 49410313 (+)
LOC110490226 ifrd1 coding upstream 36482 49383233 ~ 49394324 (+)
LOC110490220 LOC106576044 coding upstream 189756 49110297 ~ 49241050 (+)
LOC110490219 LOC100286412 coding upstream 324124 49065642 ~ 49106682 (+)
LOC110490217 LOC106576042 coding upstream 372040 49051915 ~ 49058766 (+)
foxp2 LOC106609245 coding downstream 249409 49680531 ~ 49794962 (+)
LOC110490234 LOC106576051 coding downstream 407401 49838523 ~ 49863700 (+)
LOC118938923 NA coding downstream 588495 50019617 ~ 50023828 (+)
LOC110490236 LOC106609240 coding downstream 730822 50161944 ~ 50170265 (+)
LOC110490239 NA coding downstream 751698 50182820 ~ 50187125 (+)
G1301708 NA non-coding upstream 32784 49397758 ~ 49398022 (+)
G1301706 NA non-coding upstream 33885 49395223 ~ 49396921 (+)
G1301684 NA non-coding upstream 84497 49346093 ~ 49346309 (+)
G1301490 NA non-coding upstream 443758 48982949 ~ 48987048 (+)
G1301728 NA non-coding downstream 1727 49432849 ~ 49433060 (+)
G1302201 NA non-coding downstream 15023 49446145 ~ 49488630 (+)
G1302242 NA non-coding downstream 78408 49509530 ~ 49510799 (+)
G1302318 NA non-coding downstream 115596 49546718 ~ 49546993 (+)
G1302335 NA non-coding downstream 129804 49560926 ~ 49561226 (+)
G1301458 NA other upstream 500218 48930046 ~ 48930588 (+)
G1301200 NA other upstream 845543 48584707 ~ 48585263 (+)
kiss2 kiss2 other upstream 1070367 48359799 ~ 48360553 (+)
G1303015 NA other downstream 747152 50178274 ~ 50178565 (+)
G1303095 LOC106609233 other downstream 870323 50301445 ~ 50302351 (+)
LOC110490250 LOC106609227 other downstream 928088 50358439 ~ 50372219 (+)
G1303641 NA other downstream 1316240 50747362 ~ 50747715 (+)
G1303804 NA other downstream 1640703 51071825 ~ 51073294 (+)

Expression


Co-expression Network