G1301728


Basic Information

Item Value
gene id G1301728
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 49432849 ~ 49433060 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1485142
acctaagtatgattctcagtcagagacaactaatgacacctgcctctgattgagaaccatactaggccgaaaacatagaaatgccccaaaacatagactgcccacccaactcacgccctgaccatactaaataaatacaaaacaacggaaatagaggtcagaacgtgacaggtccAATGATCTCCCAGCCAATCTGCGGCATTGTACATGTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1485142 True 212 lncRNA 0.45 1 49432849 49433060

Neighbor

gene id symbol gene type direction distance location
LOC110490228 NA coding upstream 22651 49398275 ~ 49410313 (+)
LOC110490226 ifrd1 coding upstream 38525 49383233 ~ 49394324 (+)
LOC110490220 LOC106576044 coding upstream 191799 49110297 ~ 49241050 (+)
LOC110490219 LOC100286412 coding upstream 326167 49065642 ~ 49106682 (+)
LOC110490217 LOC106576042 coding upstream 374083 49051915 ~ 49058766 (+)
foxp2 LOC106609245 coding downstream 247471 49680531 ~ 49794962 (+)
LOC110490234 LOC106576051 coding downstream 405463 49838523 ~ 49863700 (+)
LOC118938923 NA coding downstream 586557 50019617 ~ 50023828 (+)
LOC110490236 LOC106609240 coding downstream 728884 50161944 ~ 50170265 (+)
LOC110490239 NA coding downstream 749760 50182820 ~ 50187125 (+)
G1301727 NA non-coding upstream 1727 49430806 ~ 49431122 (+)
G1301708 NA non-coding upstream 34827 49397758 ~ 49398022 (+)
G1301706 NA non-coding upstream 35928 49395223 ~ 49396921 (+)
G1301684 NA non-coding upstream 86540 49346093 ~ 49346309 (+)
G1302201 NA non-coding downstream 13085 49446145 ~ 49488630 (+)
G1302242 NA non-coding downstream 76470 49509530 ~ 49510799 (+)
G1302318 NA non-coding downstream 113658 49546718 ~ 49546993 (+)
G1302335 NA non-coding downstream 127866 49560926 ~ 49561226 (+)
G1302377 NA non-coding downstream 166016 49599076 ~ 49599367 (+)
G1301458 NA other upstream 502261 48930046 ~ 48930588 (+)
G1301200 NA other upstream 847586 48584707 ~ 48585263 (+)
kiss2 kiss2 other upstream 1072410 48359799 ~ 48360553 (+)
G1303015 NA other downstream 745214 50178274 ~ 50178565 (+)
G1303095 LOC106609233 other downstream 868385 50301445 ~ 50302351 (+)
LOC110490250 LOC106609227 other downstream 926150 50358439 ~ 50372219 (+)
G1303641 NA other downstream 1314302 50747362 ~ 50747715 (+)
G1303804 NA other downstream 1638765 51071825 ~ 51073294 (+)

Expression


Co-expression Network