Gene
RNA
| Item | Value |
|---|---|
| gene id | G1302656 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 49782648 ~ 49784742 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: forkhead box protein P2 isoform X6 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1486159 | True | 201 | lncRNA | 0.56 | 2 | 49782648 | 49784742 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118938812 | LOC106576050 | coding | downstream | 100446 | 49671334 ~ 49682202 (-) |
| LOC118938922 | NA | coding | downstream | 168086 | 49613936 ~ 49614562 (-) |
| LOC110490232 | LOC106576049 | coding | downstream | 170017 | 49608361 ~ 49612631 (-) |
| LOC110490230 | LOC106609249 | coding | downstream | 269230 | 49496661 ~ 49513418 (-) |
| LOC110490229 | LOC106576106 | coding | downstream | 293970 | 49486316 ~ 49488678 (-) |
| LOC110490235 | LOC106576052 | coding | upstream | 319594 | 50104336 ~ 50144944 (-) |
| LOC110490237 | LOC106609239 | coding | upstream | 385527 | 50170269 ~ 50175057 (-) |
| LOC110490238 | NA | coding | upstream | 401617 | 50186359 ~ 50187380 (-) |
| LOC110490240 | strip2 | coding | upstream | 404955 | 50189697 ~ 50234620 (-) |
| trnaa-ugc-121 | NA | coding | upstream | 421936 | 50206678 ~ 50206751 (-) |
| G1302649 | LOC106609245 | non-coding | downstream | 17840 | 49764553 ~ 49764808 (-) |
| G1302648 | NA | non-coding | downstream | 19045 | 49763182 ~ 49763603 (-) |
| G1302644 | NA | non-coding | downstream | 28624 | 49753816 ~ 49754024 (-) |
| G1302636 | NA | non-coding | downstream | 53204 | 49729231 ~ 49729444 (-) |
| G1302626 | NA | non-coding | downstream | 66550 | 49715889 ~ 49716098 (-) |
| G1302732 | NA | non-coding | upstream | 126146 | 49910888 ~ 49911426 (-) |
| G1302767 | NA | non-coding | upstream | 163762 | 49948504 ~ 49949990 (-) |
| G1302783 | NA | non-coding | upstream | 179773 | 49964515 ~ 49964754 (-) |
| G1302809 | NA | non-coding | upstream | 196850 | 49981592 ~ 49981853 (-) |
| G1302931 | NA | non-coding | upstream | 312219 | 50096961 ~ 50106202 (-) |
| G1302602 | NA | other | downstream | 118352 | 49663951 ~ 49664296 (-) |
| si:dkeyp-27e10.3 | LOC106576037 | other | downstream | 943497 | 48822973 ~ 48839311 (-) |
| celsr1a | LOC106576003 | other | downstream | 2078610 | 47584674 ~ 47707520 (-) |
| tbc1d22a | tbc1d22a | other | downstream | 2563033 | 47217532 ~ 47405004 (-) |
| tafa5a | fam19a5 | other | downstream | 2829224 | 46822067 ~ 46995100 (-) |
| LOC110490244 | LOC106609225 | other | upstream | 514722 | 50290050 ~ 50301082 (-) |
| LOC110490264 | LOC106576080 | other | upstream | 1414487 | 51199223 ~ 51205927 (-) |
| LOC110490744 | LOC106576129 | other | upstream | 2001889 | 51785488 ~ 51793354 (-) |
| G1304896 | LOC107662719 | other | upstream | 2136753 | 51921495 ~ 51922528 (-) |
| G1304988 | NA | other | upstream | 2204969 | 51989711 ~ 51990173 (-) |
