G1302732


Basic Information

Item Value
gene id G1302732
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 49910888 ~ 49911426 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1486236
gtcttaccgagactgccatactgagaccgTCATACTGAGACActcatactgacatactgagactgtcatactgacatactgagactgccaaACTGAGACTGCCACAATGAGACTGctatactgacatactgagactgtcatactgagactgccatactgacatactgagacacTCATGCTGAGaatgccatactgagactgccatactgagactgccatactgccatactgagactgccagaCTGAGACTTaaatactgagactgtcatactgagtctgtcatactgacatactgagactgtcatactgaggctgccataccGAGGTTgccatactgaggctgccatactgacatactgagactgtcatactgagactgcctactgagcctgtcatactgaggctgccatactgagactgccatactgagcctgccatactgagactgccatactgagactgccatactgagactgtcatactgagactgtcatactgagactgccatactgaacTGCCATACTGagcctgtcatactg

Function

NR:

description
uncharacterized protein LOC110507216

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1486236 True 539 lncRNA 0.47 1 49910888 49911426

Neighbor

gene id symbol gene type direction distance location
LOC118938812 LOC106576050 coding downstream 228686 49671334 ~ 49682202 (-)
LOC118938922 NA coding downstream 296326 49613936 ~ 49614562 (-)
LOC110490232 LOC106576049 coding downstream 298257 49608361 ~ 49612631 (-)
LOC110490230 LOC106609249 coding downstream 397470 49496661 ~ 49513418 (-)
LOC110490229 LOC106576106 coding downstream 422210 49486316 ~ 49488678 (-)
LOC110490235 LOC106576052 coding upstream 192910 50104336 ~ 50144944 (-)
LOC110490237 LOC106609239 coding upstream 258843 50170269 ~ 50175057 (-)
LOC110490238 NA coding upstream 274933 50186359 ~ 50187380 (-)
LOC110490240 strip2 coding upstream 278271 50189697 ~ 50234620 (-)
trnaa-ugc-121 NA coding upstream 295252 50206678 ~ 50206751 (-)
G1302656 NA non-coding downstream 126146 49782648 ~ 49784742 (-)
G1302649 LOC106609245 non-coding downstream 146080 49764553 ~ 49764808 (-)
G1302648 NA non-coding downstream 147285 49763182 ~ 49763603 (-)
G1302644 NA non-coding downstream 156864 49753816 ~ 49754024 (-)
G1302636 NA non-coding downstream 181444 49729231 ~ 49729444 (-)
G1302767 NA non-coding upstream 37078 49948504 ~ 49949990 (-)
G1302783 NA non-coding upstream 53089 49964515 ~ 49964754 (-)
G1302809 NA non-coding upstream 70166 49981592 ~ 49981853 (-)
G1302931 NA non-coding upstream 185535 50096961 ~ 50106202 (-)
G1302960 NA non-coding upstream 213277 50124703 ~ 50124936 (-)
G1302602 NA other downstream 246592 49663951 ~ 49664296 (-)
si:dkeyp-27e10.3 LOC106576037 other downstream 1071737 48822973 ~ 48839311 (-)
celsr1a LOC106576003 other downstream 2206850 47584674 ~ 47707520 (-)
tbc1d22a tbc1d22a other downstream 2691273 47217532 ~ 47405004 (-)
tafa5a fam19a5 other downstream 2957464 46822067 ~ 46995100 (-)
LOC110490244 LOC106609225 other upstream 388038 50290050 ~ 50301082 (-)
LOC110490264 LOC106576080 other upstream 1287803 51199223 ~ 51205927 (-)
LOC110490744 LOC106576129 other upstream 1875205 51785488 ~ 51793354 (-)
G1304896 LOC107662719 other upstream 2010069 51921495 ~ 51922528 (-)
G1304988 NA other upstream 2078285 51989711 ~ 51990173 (-)

Expression


Co-expression Network