G1302976


Basic Information

Item Value
gene id G1302976
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 50145739 ~ 50146580 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1486491
gggagaccagatgttgctggaagtggtgttggcggaccagtaggaggcactcaTATATATGCAACACATATATATGAGGGCCAATTCCAAGAATAAACTGTTCAACAGGCTGCTGTCATCAGGCAAAAGTTTTCAGAGGAAGTTCCTTTGGAAAATCCTTTAATTTTAATAGGAATCTCATGTGGTTAGAATTAGTGGGCACCTACAGTATCATAGTGTGTTTTATGACGGGTTATGGTGGGAAGTCGTAACATTACTGTCTATGACATCCATCTTAAtgatcagtcagtcagacaataGATTGTTAGCTCAACGAGCCAAACATTACAGTGGCTTAACATTTCgatgggatcgatatgacaacagccagtgaaagtgcagggcaccaaattcaaaacaacagaaatctcataattaaaattcctcaaaaatacatgtatcttatacagttttaaaggtaatcttgttgttaatcccactacggtgtccgatttcaaataggctttacagcgaaagcaccacaaacgataatgtaaggtcaccaccaactcacagaaaaactcagccattttccagccaaagagaggagtcacaaaaagcacaaatagagataaaatgtatcactaacctttgatgatcgtcatcagatgacactcataggacttcatgttacacaatacatatgtGTTTTGTttaataaagttcatatttatataaaagaatctcagtatacattggcgcgttacgttcactagttccaaaaacatctggtgatattgcagagagccacatcattttacagaattacttattataaatgttgataaatacaattgttagac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1486491 True 842 lncRNA 0.37 1 50145739 50146580

Neighbor

gene id symbol gene type direction distance location
LOC110490235 LOC106576052 coding downstream 934 50104336 ~ 50144944 (-)
LOC118938812 LOC106576050 coding downstream 463537 49671334 ~ 49682202 (-)
LOC118938922 NA coding downstream 531177 49613936 ~ 49614562 (-)
LOC110490232 LOC106576049 coding downstream 533108 49608361 ~ 49612631 (-)
LOC110490230 LOC106609249 coding downstream 632321 49496661 ~ 49513418 (-)
LOC110490237 LOC106609239 coding upstream 23689 50170269 ~ 50175057 (-)
LOC110490238 NA coding upstream 39779 50186359 ~ 50187380 (-)
LOC110490240 strip2 coding upstream 43117 50189697 ~ 50234620 (-)
trnaa-ugc-121 NA coding upstream 60098 50206678 ~ 50206751 (-)
LOC110490242 ahcyl2 coding upstream 90045 50236625 ~ 50283251 (-)
G1302960 NA non-coding downstream 20803 50124703 ~ 50124936 (-)
G1302931 NA non-coding downstream 39537 50096961 ~ 50106202 (-)
G1302809 NA non-coding downstream 163886 49981592 ~ 49981853 (-)
G1302783 NA non-coding downstream 180985 49964515 ~ 49964754 (-)
G1302981 NA non-coding upstream 1633 50148213 ~ 50148477 (-)
G1303168 NA non-coding upstream 33771 50180351 ~ 50180576 (-)
G1303246 NA non-coding upstream 252921 50399501 ~ 50400084 (-)
LOC110490255 tnni1 non-coding upstream 315355 50460754 ~ 50467994 (-)
G1303384 NA non-coding upstream 394849 50541429 ~ 50541656 (-)
G1302602 NA other downstream 481443 49663951 ~ 49664296 (-)
si:dkeyp-27e10.3 LOC106576037 other downstream 1306588 48822973 ~ 48839311 (-)
celsr1a LOC106576003 other downstream 2441701 47584674 ~ 47707520 (-)
tbc1d22a tbc1d22a other downstream 2926124 47217532 ~ 47405004 (-)
tafa5a fam19a5 other downstream 3192315 46822067 ~ 46995100 (-)
LOC110490244 LOC106609225 other upstream 152884 50290050 ~ 50301082 (-)
LOC110490264 LOC106576080 other upstream 1052649 51199223 ~ 51205927 (-)
LOC110490744 LOC106576129 other upstream 1640051 51785488 ~ 51793354 (-)
G1304896 LOC107662719 other upstream 1774915 51921495 ~ 51922528 (-)
G1304988 NA other upstream 1843131 51989711 ~ 51990173 (-)

Expression


Co-expression Network