Gene
RNA
| Item | Value |
|---|---|
| gene id | G1302981 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 50148213 ~ 50148477 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1486496 | True | 265 | lncRNA | 0.40 | 1 | 50148213 | 50148477 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110490235 | LOC106576052 | coding | downstream | 3408 | 50104336 ~ 50144944 (-) |
| LOC118938812 | LOC106576050 | coding | downstream | 466011 | 49671334 ~ 49682202 (-) |
| LOC118938922 | NA | coding | downstream | 533651 | 49613936 ~ 49614562 (-) |
| LOC110490232 | LOC106576049 | coding | downstream | 535582 | 49608361 ~ 49612631 (-) |
| LOC110490230 | LOC106609249 | coding | downstream | 634795 | 49496661 ~ 49513418 (-) |
| LOC110490237 | LOC106609239 | coding | upstream | 21792 | 50170269 ~ 50175057 (-) |
| LOC110490238 | NA | coding | upstream | 37882 | 50186359 ~ 50187380 (-) |
| LOC110490240 | strip2 | coding | upstream | 41220 | 50189697 ~ 50234620 (-) |
| trnaa-ugc-121 | NA | coding | upstream | 58201 | 50206678 ~ 50206751 (-) |
| LOC110490242 | ahcyl2 | coding | upstream | 88148 | 50236625 ~ 50283251 (-) |
| G1302976 | NA | non-coding | downstream | 1633 | 50145739 ~ 50146580 (-) |
| G1302960 | NA | non-coding | downstream | 23277 | 50124703 ~ 50124936 (-) |
| G1302931 | NA | non-coding | downstream | 42011 | 50096961 ~ 50106202 (-) |
| G1302809 | NA | non-coding | downstream | 166360 | 49981592 ~ 49981853 (-) |
| G1303168 | NA | non-coding | upstream | 31874 | 50180351 ~ 50180576 (-) |
| G1303246 | NA | non-coding | upstream | 251024 | 50399501 ~ 50400084 (-) |
| LOC110490255 | tnni1 | non-coding | upstream | 313458 | 50460754 ~ 50467994 (-) |
| G1303384 | NA | non-coding | upstream | 392952 | 50541429 ~ 50541656 (-) |
| G1303441 | NA | non-coding | upstream | 433490 | 50581967 ~ 50582275 (-) |
| G1302602 | NA | other | downstream | 483917 | 49663951 ~ 49664296 (-) |
| si:dkeyp-27e10.3 | LOC106576037 | other | downstream | 1309062 | 48822973 ~ 48839311 (-) |
| celsr1a | LOC106576003 | other | downstream | 2444175 | 47584674 ~ 47707520 (-) |
| tbc1d22a | tbc1d22a | other | downstream | 2928598 | 47217532 ~ 47405004 (-) |
| tafa5a | fam19a5 | other | downstream | 3194789 | 46822067 ~ 46995100 (-) |
| LOC110490244 | LOC106609225 | other | upstream | 150987 | 50290050 ~ 50301082 (-) |
| LOC110490264 | LOC106576080 | other | upstream | 1050752 | 51199223 ~ 51205927 (-) |
| LOC110490744 | LOC106576129 | other | upstream | 1638154 | 51785488 ~ 51793354 (-) |
| G1304896 | LOC107662719 | other | upstream | 1773018 | 51921495 ~ 51922528 (-) |
| G1304988 | NA | other | upstream | 1841234 | 51989711 ~ 51990173 (-) |
