G1303108



Basic Information


Item Value
gene id G1303108
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 50341772 ~ 50343909 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1486632
TGTGAATACAGTATAGGTCATTTAAGTTCAAATTCATTGAGGTGGTATCCCAAAATATATCGTAAATTCCCTTGGGAAGAATAAAAGATAGGAGTCAACAGTTTTGAAAAATACCATTTGCTTTTCTTGAAAAAAAAAACGTAGGCTCATTAAAACATGAATTTAAAGTGCACATAcggggaaaaaatgaacatttaccACAGATTAAGAACATACATTCGACAATGATAAAATTAAATACACATTCCATGTCATCAAGTTTAGCAGGCCCTGGATCAGCTGAAATGCACTTGTGGCCTTGGTTAAAACCACTACAGTAATTTAGCAACTGATACCAATCCAACCAGAAGAACTACTTGTACCGTTTTAATTTATGTACCTACAGTAAATAAAATCAGTATACCTTTAAATAATTTTGATAAGGAAAATATTTCAGATGCGTGCAGTTAATGTTAAATGACCGTTAAGACTTACCacgtttacatgcacaccaatatTCCGTTATTATTCGGGGTACTCAAGTACTCTCTTGAGTTGACACATGTAAACATCATATCTCGTTTACAATAACCCGAAAAAGTTTGTATCCCGGTTATGAGAAACCCGGATAAAATGCCTTGGATTTGCTGATCTTAGATGGGATACTGTGGCATGTATCCCGTTTACTGTTGTTTTTCGCAGTCTGTGTAGGCTCAGTTTTAGGTATGATGGGTGTTgtgtgatgttttcatctgattgttaaacaaatcacttcaaaaagtaggcaAAATGCTCAGTTCCATCCACCATAATAATTTATTTTGCCGATACTCCATCCTGGACCGTGTAGCGTAATTTAGACAACTTTCTGTTTACAATTTCCGACATTTGGAAGGACATTTGTTTGTCAACTATAGTCTTCTGTCATAACTTGTTGCCCcagaagactaaataaagtagTGCTCAACAGAATAATGTCTTACATTGACAGAACGAGTGCATTAGTAATCTAGTTAAAACCGGTAAAGTTGTCTGTTTCGTTTAGGGACCCGGGGAGAACAGTGAAAAGATTTGGTCTTTGCAAAATGCCCAAATGTCATCAGTTTGACTGGTTTTAGTGAAATTAAAAGCTGAGAAAACGATTAAATTGGTTTATGATAAGACTTTAGTCTGTCTTgggtgcatattttatgtggttgaaatactgtctGCTTGCATAACGGTGTCAACGAGAACACACGCACTAGCATTTCCTCAAGAGATGCTGAAAGAATTcgtatttctccactcctgtttccgagacaaaattaacatttgttgtgtaatttCACTGCAAGAAATGCATAATTCCGcaagagttaatattatattacgcTACATGTGAAAGGTTATAGGCCATATTTCAGGTAATATTTAACCCATATCAATTTAAATGAGGAATAATCCGTTTATTCATCGGTACAGGGATACCTGTGAGCGGGATATCAAAAGTGCATGTAAACAGCTTAACCCGAATAAGACCTTCTGCGGGATATGAGCTACTGTCCACAATACCTTGCGCATGTAAACGTGGTCACTGACTACAGTGTGTGCTACAGGCAATGACTAAAAATCCGCctagtggatgtgtgtgtgagattcTATGAGTGAGTGATGGAGAGTTTTGTGTGTCTTTGAAATCTGATCTCTACTAAGCAAATGAGCAGATTCAATCAATCATTCTATACAAGTAATCATTATACACTCCAGTAAACTGATAAAGGAATTGGAATAATCGTTAGCTGCTTGGAACTTCCAATCTCAGACCACAAACATTTAGAGGGCCCTGCCCCCACTCGTAAAAGGCGCTGAAGTAATatcttaataaaaataaaaaaaaacgcgTTTCTGACCAAATATATACATAAACTGGACATACACATTCATAGACATGTTGTACATACATCTACAGTAGTGATCAGTGGACATAGTCTGACTGACAGGCAGTAGGCCCCATAGGGAAGGAGTAGGAAACAACATGGCCCCCGTGAGGAAGGCTTCACAGCTCGTGTGTCCGTGCCCGTCTCTCCCTCCACATGGCCCGAATCTCAGTCACGATCAGCGGCAAGATGAAGACTATGCTGCACCC

Function


NR:

description
sugar phosphate exchanger 3-like

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1486632 True 2107 lncRNA 0.38 2 50341772 50343909

Neighbor


gene id symbol gene type direction distance location
cdkn1d LOC106576064 coding upstream 8318 50321349 ~ 50333454 (+)
LOC110490239 NA coding upstream 155647 50182820 ~ 50187125 (+)
LOC110490236 LOC106609240 coding upstream 171507 50161944 ~ 50170265 (+)
LOC118938923 NA coding upstream 317944 50019617 ~ 50023828 (+)
LOC110490234 LOC106576051 coding upstream 478072 49838523 ~ 49863700 (+)
LOC110490251 LOC106609232 coding downstream 10926 50354835 ~ 50357815 (+)
LOC110490250 LOC106609227 coding downstream 14530 50358439 ~ 50372219 (+)
LOC110490256 LOC106576072 coding downstream 217106 50561015 ~ 50577585 (+)
LOC110490263 LOC106576079 coding downstream 832139 51176048 ~ 51199225 (+)
LOC110490740 LOC106576082 coding downstream 872998 51216907 ~ 51273536 (+)
G1303097 NA non-coding upstream 35550 50305647 ~ 50306222 (+)
G1303024 NA non-coding upstream 57593 50284000 ~ 50284179 (+)
G1303020 NA non-coding upstream 102698 50232428 ~ 50239074 (+)
G1303040 NA non-coding upstream 111148 50223183 ~ 50230624 (+)
G1303019 NA non-coding upstream 144621 50196844 ~ 50197151 (+)
G1303152 NA non-coding downstream 104570 50448479 ~ 50448734 (+)
G1303357 NA non-coding downstream 180984 50524893 ~ 50525189 (+)
G1303412 NA non-coding downstream 237182 50581091 ~ 50581245 (+)
G1303422 NA non-coding downstream 240914 50584823 ~ 50585207 (+)
G1303428 NA non-coding downstream 253181 50597090 ~ 50597300 (+)
G1303095 LOC106609233 other upstream 39421 50301445 ~ 50302351 (+)
G1303015 NA other upstream 163207 50178274 ~ 50178565 (+)
LOC110490228 NA other upstream 931459 49398275 ~ 49410313 (+)
G1301706 NA other upstream 945914 49395223 ~ 49396921 (+)
G1301458 NA other upstream 1411184 48930046 ~ 48930588 (+)
G1303641 NA other downstream 403453 50747362 ~ 50747715 (+)
G1303804 NA other downstream 727916 51071825 ~ 51073294 (+)
G1303950 LOC106576084 other downstream 955494 51299403 ~ 51299761 (+)
atxn7l1 LOC106576087 other downstream 1007484 51351361 ~ 51382579 (+)

Expression



Co-expression Network