G1303246


Basic Information

Item Value
gene id G1303246
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 50399501 ~ 50400084 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1486782
gtagagtccatgcccggatgaattgaggctgttctgagggcaactcaatattaggaaggtgttcttaatgttttatacagtATTTACTAATAGTTTTGAGAAGCGCTGTTAGCTaccatgtattttttttgtatatgTATTAATAATTGCCTTAGTAAGATGATGTGCCGTGTTGGGAGAAAATAGTCTAGCGTCACCCAGGGAATTTGAAATACAAATCATAGCAAAGTGGATGAGTTATAACCATGAAGTCATGAagggaaaaaaacacacagcACTTAACAGCAGTCATTTATTTGTGTTGTAAAAGCACATATCACATATTGTCAGAGTACGTATTAGTTTTAATATGAAATGTGGCACGGTTCCTACCATGGATCACATGCAGGTTATCAGGAGGACTTAGCGATTTAGTCAGGCAGGCTGCTTCCCATGCTGGGCTGCGTGGATGCATTCCAACATACCAGTGAttcgtctcaaatggcaccctattccctacgtagtgcactacttttgaccagggcccatatgccGCATTTATCCCATTATTTTACCCAAAAGGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1486782 True 563 lncRNA 0.40 2 50399501 50400084

Neighbor

gene id symbol gene type direction distance location
LOC110490254 LOC106576067 coding downstream 8483 50378042 ~ 50391018 (-)
LOC110490247 LOC106576065 coding downstream 44849 50341725 ~ 50354652 (-)
LOC110490246 LOC106576063 coding downstream 91539 50305590 ~ 50307962 (-)
LOC110490244 LOC106609225 coding downstream 98419 50290050 ~ 50301082 (-)
LOC110490245 tmem209 coding downstream 109499 50284220 ~ 50290002 (-)
LOC110490255 tnni1 coding upstream 60670 50460754 ~ 50467994 (-)
LOC110490257 LOC106576073 coding upstream 386430 50786514 ~ 50929155 (-)
LOC110490739 LOC106576074 coding upstream 584911 50984995 ~ 51090056 (-)
LOC110490260 LOC106576076 coding upstream 695751 51095835 ~ 51123705 (-)
LOC110490261 LOC106609216 coding upstream 723946 51124030 ~ 51126635 (-)
G1303168 NA non-coding downstream 218925 50180351 ~ 50180576 (-)
G1302981 NA non-coding downstream 251024 50148213 ~ 50148477 (-)
G1302976 NA non-coding downstream 252921 50145739 ~ 50146580 (-)
LOC110490235 LOC106576052 non-coding downstream 254557 50104336 ~ 50144944 (-)
G1302960 NA non-coding downstream 274565 50124703 ~ 50124936 (-)
G1303384 NA non-coding upstream 141345 50541429 ~ 50541656 (-)
G1303441 NA non-coding upstream 181883 50581967 ~ 50582275 (-)
G1303442 NA non-coding upstream 182338 50582422 ~ 50582797 (-)
G1303444 NA non-coding upstream 184811 50584895 ~ 50585151 (-)
G1302602 NA other downstream 735205 49663951 ~ 49664296 (-)
si:dkeyp-27e10.3 LOC106576037 other downstream 1560350 48822973 ~ 48839311 (-)
celsr1a LOC106576003 other downstream 2695463 47584674 ~ 47707520 (-)
tbc1d22a tbc1d22a other downstream 3179886 47217532 ~ 47405004 (-)
LOC110490264 LOC106576080 other upstream 799145 51199223 ~ 51205927 (-)
LOC110490744 LOC106576129 other upstream 1386547 51785488 ~ 51793354 (-)
G1304896 LOC107662719 other upstream 1521411 51921495 ~ 51922528 (-)
G1304988 NA other upstream 1589627 51989711 ~ 51990173 (-)
LOC110490288 LOC106609184 other upstream 2406899 52630838 ~ 52809711 (-)

Expression


Co-expression Network