Gene
RNA
| Item | Value |
|---|---|
| gene id | G1303441 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 50581967 ~ 50582275 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1486991 | True | 309 | lncRNA | 0.36 | 1 | 50581967 | 50582275 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110490255 | tnni1 | coding | downstream | 113992 | 50460754 ~ 50467994 (-) |
| LOC110490253 | LOC105029072 | coding | downstream | 137069 | 50391258 ~ 50444898 (-) |
| LOC110490254 | LOC106576067 | coding | downstream | 190949 | 50378042 ~ 50391018 (-) |
| LOC110490247 | LOC106576065 | coding | downstream | 227315 | 50341725 ~ 50354652 (-) |
| LOC110490246 | LOC106576063 | coding | downstream | 274005 | 50305590 ~ 50307962 (-) |
| LOC110490257 | LOC106576073 | coding | upstream | 204239 | 50786514 ~ 50929155 (-) |
| LOC110490739 | LOC106576074 | coding | upstream | 402720 | 50984995 ~ 51090056 (-) |
| LOC110490260 | LOC106576076 | coding | upstream | 513560 | 51095835 ~ 51123705 (-) |
| LOC110490261 | LOC106609216 | coding | upstream | 541755 | 51124030 ~ 51126635 (-) |
| c15h12orf56 | cssa17h12orf56 | coding | upstream | 544460 | 51126735 ~ 51149243 (-) |
| G1303384 | NA | non-coding | downstream | 40311 | 50541429 ~ 50541656 (-) |
| G1303246 | NA | non-coding | downstream | 181883 | 50399501 ~ 50400084 (-) |
| G1303168 | NA | non-coding | downstream | 401391 | 50180351 ~ 50180576 (-) |
| G1302981 | NA | non-coding | downstream | 433490 | 50148213 ~ 50148477 (-) |
| G1303442 | NA | non-coding | upstream | 147 | 50582422 ~ 50582797 (-) |
| G1303444 | NA | non-coding | upstream | 2620 | 50584895 ~ 50585151 (-) |
| G1303448 | NA | non-coding | upstream | 6238 | 50588513 ~ 50588772 (-) |
| G1303450 | NA | non-coding | upstream | 7452 | 50589727 ~ 50590022 (-) |
| G1303453 | NA | non-coding | upstream | 9604 | 50591879 ~ 50592099 (-) |
| LOC110490244 | LOC106609225 | other | downstream | 280960 | 50290050 ~ 50301082 (-) |
| G1302602 | NA | other | downstream | 917671 | 49663951 ~ 49664296 (-) |
| si:dkeyp-27e10.3 | LOC106576037 | other | downstream | 1742816 | 48822973 ~ 48839311 (-) |
| celsr1a | LOC106576003 | other | downstream | 2877929 | 47584674 ~ 47707520 (-) |
| tbc1d22a | tbc1d22a | other | downstream | 3362352 | 47217532 ~ 47405004 (-) |
| LOC110490264 | LOC106576080 | other | upstream | 616954 | 51199223 ~ 51205927 (-) |
| LOC110490744 | LOC106576129 | other | upstream | 1204356 | 51785488 ~ 51793354 (-) |
| G1304896 | LOC107662719 | other | upstream | 1339220 | 51921495 ~ 51922528 (-) |
| G1304988 | NA | other | upstream | 1407436 | 51989711 ~ 51990173 (-) |
| LOC110490288 | LOC106609184 | other | upstream | 2224708 | 52630838 ~ 52809711 (-) |
