Gene
RNA
| Item | Value |
|---|---|
| gene id | G1304158 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 50758258 ~ 50758596 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1487801 | True | 339 | lncRNA | 0.55 | 1 | 50758258 | 50758596 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110490255 | tnni1 | coding | downstream | 290283 | 50460754 ~ 50467994 (-) |
| LOC110490253 | LOC105029072 | coding | downstream | 313360 | 50391258 ~ 50444898 (-) |
| LOC110490254 | LOC106576067 | coding | downstream | 367240 | 50378042 ~ 50391018 (-) |
| LOC110490247 | LOC106576065 | coding | downstream | 403606 | 50341725 ~ 50354652 (-) |
| LOC110490246 | LOC106576063 | coding | downstream | 450296 | 50305590 ~ 50307962 (-) |
| LOC110490257 | LOC106576073 | coding | upstream | 27918 | 50786514 ~ 50929155 (-) |
| LOC110490739 | LOC106576074 | coding | upstream | 226399 | 50984995 ~ 51090056 (-) |
| LOC110490260 | LOC106576076 | coding | upstream | 337239 | 51095835 ~ 51123705 (-) |
| LOC110490261 | LOC106609216 | coding | upstream | 365434 | 51124030 ~ 51126635 (-) |
| c15h12orf56 | cssa17h12orf56 | coding | upstream | 368139 | 51126735 ~ 51149243 (-) |
| G1303492 | NA | non-coding | downstream | 130156 | 50627895 ~ 50628102 (-) |
| G1303473 | NA | non-coding | downstream | 143052 | 50614786 ~ 50615206 (-) |
| G1303457 | NA | non-coding | downstream | 156779 | 50601245 ~ 50601479 (-) |
| G1303453 | NA | non-coding | downstream | 166159 | 50591879 ~ 50592099 (-) |
| G1303450 | NA | non-coding | downstream | 168236 | 50589727 ~ 50590022 (-) |
| G1304162 | NA | non-coding | upstream | 15712 | 50774308 ~ 50774554 (-) |
| G1304168 | NA | non-coding | upstream | 25825 | 50784421 ~ 50784647 (-) |
| G1304232 | NA | non-coding | upstream | 144628 | 50903224 ~ 50903487 (-) |
| G1304291 | NA | non-coding | upstream | 250270 | 51008866 ~ 51010401 (-) |
| G1304302 | NA | non-coding | upstream | 292897 | 51051493 ~ 51056458 (-) |
| LOC110490244 | LOC106609225 | other | downstream | 457251 | 50290050 ~ 50301082 (-) |
| G1302602 | NA | other | downstream | 1093962 | 49663951 ~ 49664296 (-) |
| si:dkeyp-27e10.3 | LOC106576037 | other | downstream | 1919107 | 48822973 ~ 48839311 (-) |
| celsr1a | LOC106576003 | other | downstream | 3054220 | 47584674 ~ 47707520 (-) |
| tbc1d22a | tbc1d22a | other | downstream | 3538643 | 47217532 ~ 47405004 (-) |
| LOC110490264 | LOC106576080 | other | upstream | 440633 | 51199223 ~ 51205927 (-) |
| LOC110490744 | LOC106576129 | other | upstream | 1028035 | 51785488 ~ 51793354 (-) |
| G1304896 | LOC107662719 | other | upstream | 1162899 | 51921495 ~ 51922528 (-) |
| G1304988 | NA | other | upstream | 1231115 | 51989711 ~ 51990173 (-) |
| LOC110490288 | LOC106609184 | other | upstream | 2048387 | 52630838 ~ 52809711 (-) |
