Gene
RNA
| Item | Value |
|---|---|
| gene id | G1304302 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 51051493 ~ 51056458 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1487950 | True | 278 | lncRNA | 0.50 | 2 | 51051493 | 51056458 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110490257 | LOC106576073 | coding | downstream | 122338 | 50786514 ~ 50929155 (-) |
| LOC110490255 | tnni1 | coding | downstream | 583518 | 50460754 ~ 50467994 (-) |
| LOC110490253 | LOC105029072 | coding | downstream | 606595 | 50391258 ~ 50444898 (-) |
| LOC110490254 | LOC106576067 | coding | downstream | 660475 | 50378042 ~ 50391018 (-) |
| LOC110490247 | LOC106576065 | coding | downstream | 696841 | 50341725 ~ 50354652 (-) |
| LOC110490260 | LOC106576076 | coding | upstream | 39377 | 51095835 ~ 51123705 (-) |
| LOC110490261 | LOC106609216 | coding | upstream | 67572 | 51124030 ~ 51126635 (-) |
| c15h12orf56 | cssa17h12orf56 | coding | upstream | 70277 | 51126735 ~ 51149243 (-) |
| LOC110490262 | LOC106576078 | coding | upstream | 95608 | 51152066 ~ 51165196 (-) |
| LOC110490264 | LOC106576080 | coding | upstream | 142765 | 51199223 ~ 51205927 (-) |
| G1304291 | NA | non-coding | downstream | 41092 | 51008866 ~ 51010401 (-) |
| G1304232 | NA | non-coding | downstream | 148006 | 50903224 ~ 50903487 (-) |
| G1304168 | NA | non-coding | downstream | 266846 | 50784421 ~ 50784647 (-) |
| G1304162 | NA | non-coding | downstream | 276939 | 50774308 ~ 50774554 (-) |
| G1304158 | NA | non-coding | downstream | 292897 | 50758258 ~ 50758596 (-) |
| G1304342 | NA | non-coding | upstream | 95058 | 51151516 ~ 51151716 (-) |
| G1304352 | NA | non-coding | upstream | 112876 | 51169334 ~ 51169922 (-) |
| G1304355 | NA | non-coding | upstream | 118314 | 51174772 ~ 51175011 (-) |
| G1304413 | NA | non-coding | upstream | 216980 | 51273438 ~ 51274430 (-) |
| G1304426 | LOC100380855 | non-coding | upstream | 247537 | 51303995 ~ 51315870 (-) |
| LOC110490244 | LOC106609225 | other | downstream | 750486 | 50290050 ~ 50301082 (-) |
| G1302602 | NA | other | downstream | 1387197 | 49663951 ~ 49664296 (-) |
| si:dkeyp-27e10.3 | LOC106576037 | other | downstream | 2212342 | 48822973 ~ 48839311 (-) |
| celsr1a | LOC106576003 | other | downstream | 3347455 | 47584674 ~ 47707520 (-) |
| tbc1d22a | tbc1d22a | other | downstream | 3831878 | 47217532 ~ 47405004 (-) |
| LOC110490744 | LOC106576129 | other | upstream | 730173 | 51785488 ~ 51793354 (-) |
| G1304896 | LOC107662719 | other | upstream | 865037 | 51921495 ~ 51922528 (-) |
| G1304988 | NA | other | upstream | 933253 | 51989711 ~ 51990173 (-) |
| LOC110490288 | LOC106609184 | other | upstream | 1750525 | 52630838 ~ 52809711 (-) |
