Gene
RNA
| Item | Value |
|---|---|
| gene id | G1304342 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 51151516 ~ 51151716 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1488002 | True | 201 | lncRNA | 0.52 | 1 | 51151516 | 51151716 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| c15h12orf56 | cssa17h12orf56 | coding | downstream | 2273 | 51126735 ~ 51149243 (-) |
| LOC110490261 | LOC106609216 | coding | downstream | 24881 | 51124030 ~ 51126635 (-) |
| LOC110490260 | LOC106576076 | coding | downstream | 27811 | 51095835 ~ 51123705 (-) |
| LOC110490739 | LOC106576074 | coding | downstream | 61460 | 50984995 ~ 51090056 (-) |
| LOC110490257 | LOC106576073 | coding | downstream | 222361 | 50786514 ~ 50929155 (-) |
| LOC110490262 | LOC106576078 | coding | upstream | 350 | 51152066 ~ 51165196 (-) |
| LOC110490264 | LOC106576080 | coding | upstream | 47507 | 51199223 ~ 51205927 (-) |
| LOC110490265 | LOC106576097 | coding | upstream | 123115 | 51274831 ~ 51280180 (-) |
| LOC110490268 | LOC106576083 | coding | upstream | 128762 | 51280478 ~ 51287146 (-) |
| LOC110490266 | LOC106609208 | coding | upstream | 137895 | 51289611 ~ 51301497 (-) |
| G1304302 | NA | non-coding | downstream | 95058 | 51051493 ~ 51056458 (-) |
| G1304291 | NA | non-coding | downstream | 141115 | 51008866 ~ 51010401 (-) |
| G1304232 | NA | non-coding | downstream | 248029 | 50903224 ~ 50903487 (-) |
| G1304168 | NA | non-coding | downstream | 366869 | 50784421 ~ 50784647 (-) |
| G1304162 | NA | non-coding | downstream | 376962 | 50774308 ~ 50774554 (-) |
| G1304352 | NA | non-coding | upstream | 17618 | 51169334 ~ 51169922 (-) |
| G1304355 | NA | non-coding | upstream | 23056 | 51174772 ~ 51175011 (-) |
| G1304413 | NA | non-coding | upstream | 121722 | 51273438 ~ 51274430 (-) |
| G1304426 | LOC100380855 | non-coding | upstream | 152279 | 51303995 ~ 51315870 (-) |
| G1304430 | NA | non-coding | upstream | 160295 | 51312011 ~ 51312442 (-) |
| LOC110490244 | LOC106609225 | other | downstream | 850509 | 50290050 ~ 50301082 (-) |
| G1302602 | NA | other | downstream | 1487220 | 49663951 ~ 49664296 (-) |
| si:dkeyp-27e10.3 | LOC106576037 | other | downstream | 2312365 | 48822973 ~ 48839311 (-) |
| celsr1a | LOC106576003 | other | downstream | 3447478 | 47584674 ~ 47707520 (-) |
| tbc1d22a | tbc1d22a | other | downstream | 3931901 | 47217532 ~ 47405004 (-) |
| LOC110490744 | LOC106576129 | other | upstream | 634915 | 51785488 ~ 51793354 (-) |
| G1304896 | LOC107662719 | other | upstream | 769779 | 51921495 ~ 51922528 (-) |
| G1304988 | NA | other | upstream | 837995 | 51989711 ~ 51990173 (-) |
| LOC110490288 | LOC106609184 | other | upstream | 1655267 | 52630838 ~ 52809711 (-) |
