G1304352


Basic Information

Item Value
gene id G1304352
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 51169334 ~ 51169922 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1488012
cagcacaattagacccaaccaaatcatgagaaaacaaaaaggtaattacttgacacattggaaagaattaacaaaaaaacagagcaaactagaatgctatttggccctaaacagagagtacacaatggcagaatacctgaccactgtgactgacccaaacttaaggaaagctttgactatgtacagacttagtgagcatagccttgctattgagaaaggccgccgtaggcagacatggctctcaagagaagacaggctatgtgctcactgcccacaaaattaggtggaaactgagctgcacttcctaacctcctgcccaatgtatgaccatattagagagacatatttccctcagattacacagatccacaaagaatttgaaaacaaatccaattttgataaactcccatatctactggttgaaattccacagtgtgccatcacagcagcaagatttgtgacctgttgccacaagaaaagggcaaccagtgaagaacaaacaccattgtaaatacaacccatatttatgcttatttattttcccctgtgtactttaaccatttgtacattgttacaacactgtatattt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1488012 True 589 lncRNA 0.40 1 51169334 51169922

Neighbor

gene id symbol gene type direction distance location
LOC110490262 LOC106576078 coding downstream 4138 51152066 ~ 51165196 (-)
c15h12orf56 cssa17h12orf56 coding downstream 20091 51126735 ~ 51149243 (-)
LOC110490261 LOC106609216 coding downstream 42699 51124030 ~ 51126635 (-)
LOC110490260 LOC106576076 coding downstream 45629 51095835 ~ 51123705 (-)
LOC110490739 LOC106576074 coding downstream 79278 50984995 ~ 51090056 (-)
LOC110490264 LOC106576080 coding upstream 29301 51199223 ~ 51205927 (-)
LOC110490265 LOC106576097 coding upstream 104909 51274831 ~ 51280180 (-)
LOC110490268 LOC106576083 coding upstream 110556 51280478 ~ 51287146 (-)
LOC110490266 LOC106609208 coding upstream 119689 51289611 ~ 51301497 (-)
LOC110490744 LOC106576129 coding upstream 615566 51785488 ~ 51793354 (-)
G1304342 NA non-coding downstream 17618 51151516 ~ 51151716 (-)
G1304302 NA non-coding downstream 112876 51051493 ~ 51056458 (-)
G1304291 NA non-coding downstream 158933 51008866 ~ 51010401 (-)
G1304232 NA non-coding downstream 265847 50903224 ~ 50903487 (-)
G1304168 NA non-coding downstream 384687 50784421 ~ 50784647 (-)
G1304355 NA non-coding upstream 4850 51174772 ~ 51175011 (-)
G1304413 NA non-coding upstream 103516 51273438 ~ 51274430 (-)
G1304426 LOC100380855 non-coding upstream 134073 51303995 ~ 51315870 (-)
G1304430 NA non-coding upstream 142089 51312011 ~ 51312442 (-)
G1304464 NA non-coding upstream 209538 51379460 ~ 51382461 (-)
LOC110490244 LOC106609225 other downstream 868327 50290050 ~ 50301082 (-)
G1302602 NA other downstream 1505038 49663951 ~ 49664296 (-)
si:dkeyp-27e10.3 LOC106576037 other downstream 2330183 48822973 ~ 48839311 (-)
celsr1a LOC106576003 other downstream 3465296 47584674 ~ 47707520 (-)
tbc1d22a tbc1d22a other downstream 3949719 47217532 ~ 47405004 (-)
G1304896 LOC107662719 other upstream 751573 51921495 ~ 51922528 (-)
G1304988 NA other upstream 819789 51989711 ~ 51990173 (-)
LOC110490288 LOC106609184 other upstream 1637061 52630838 ~ 52809711 (-)

Expression


Co-expression Network