G1304539


Basic Information

Item Value
gene id G1304539
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 51518257 ~ 51519053 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1488225
GGAGTGTGAAGGTAGGCAGGGAGAGGCTGGATAGGGAGGCGGGCAGAGAGAGGCTTGGATAGAGAAGTAGAGAGGCTTGGATTGAGAAGTGGAGAGAGGCttggatagagaggtagagaggggcttggatagagaggtagagagaggcttGGATTggaaggtagaaagagagaggcttGGATAGAGAGGCttggatagagaggtagagagaggcttggattgagaggtagagagagGCTTGGATAGAGGTAGAGCGGCTTGGATTggaaggtagaaagagagaggcttggatagagaggtagagagaggcttGGATTggaaggtagaaagagagaggattggatagagaagtagagagaggcttggatagagaggtagagagaggcttggatagagaggtagagagaggcttggatagagaggtagagagaggcttGGAttggaaaggagaaagagagaggcttggatagagaggtagagagaggcttggatagagaggtagagagaggcttGGCATggaaggtagaaagagagaggattgGATAGagaggtaaagagagagaggggcttggatagggcggtagagagagagagaggcttggatagggaggt

Function

NR:

description
LOC797832 protein, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1488225 True 612 lncRNA 0.51 4 51518257 51519053

Neighbor

gene id symbol gene type direction distance location
LOC110490266 LOC106609208 coding downstream 216760 51289611 ~ 51301497 (-)
LOC110490268 LOC106576083 coding downstream 231111 51280478 ~ 51287146 (-)
LOC110490265 LOC106576097 coding downstream 238077 51274831 ~ 51280180 (-)
LOC110490264 LOC106576080 coding downstream 312330 51199223 ~ 51205927 (-)
LOC110490262 LOC106576078 coding downstream 353061 51152066 ~ 51165196 (-)
LOC110490744 LOC106576129 coding upstream 266435 51785488 ~ 51793354 (-)
LOC118936382 NA coding upstream 298055 51817108 ~ 51819851 (-)
LOC110490745 LOC106576126 coding upstream 608934 52127987 ~ 52131038 (-)
LOC110490277 LOC106576111 coding upstream 660366 52179419 ~ 52183904 (-)
LOC110490278 LOC106576113 coding upstream 674009 52193062 ~ 52203096 (-)
G1304464 NA non-coding downstream 135796 51379460 ~ 51382461 (-)
G1304426 LOC100380855 non-coding downstream 202387 51303995 ~ 51315870 (-)
G1304430 NA non-coding downstream 205815 51312011 ~ 51312442 (-)
G1304413 NA non-coding downstream 243827 51273438 ~ 51274430 (-)
G1304355 NA non-coding downstream 343246 51174772 ~ 51175011 (-)
G1304570 NA non-coding upstream 52324 51571377 ~ 51572035 (-)
G1304581 NA non-coding upstream 64785 51583838 ~ 51645484 (-)
G1304577 NA non-coding upstream 64900 51583953 ~ 51651154 (-)
G1304586 NA non-coding upstream 67440 51586493 ~ 51589206 (-)
G1304584 NA non-coding upstream 109179 51628232 ~ 51629472 (-)
LOC110490244 LOC106609225 other downstream 1217250 50290050 ~ 50301082 (-)
G1302602 NA other downstream 1853961 49663951 ~ 49664296 (-)
si:dkeyp-27e10.3 LOC106576037 other downstream 2679106 48822973 ~ 48839311 (-)
celsr1a LOC106576003 other downstream 3814219 47584674 ~ 47707520 (-)
G1304896 LOC107662719 other upstream 402442 51921495 ~ 51922528 (-)
G1304988 NA other upstream 470658 51989711 ~ 51990173 (-)
LOC110490288 LOC106609184 other upstream 1287930 52630838 ~ 52809711 (-)
G1306232 LOC106576137 other upstream 1535796 53054849 ~ 53062280 (-)

Expression


Co-expression Network