G1304634


Basic Information

Item Value
gene id G1304634
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 51731098 ~ 51731322 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1488341
atgtagtagcccaaaaaattttaaacaaatcaaaatatagtttatatttgagattcttcctttgtacactcttagaattccctcaaccagcttcaactgaaatatttttccaacagtcttgaaggagttcccacatgtgctgagcacttgttggctgcttttcctttactctgcggtccatctcatcccaaccatctcaattgggttgagatcaggtgattgtgg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1488341 True 225 lncRNA 0.39 1 51731098 51731322

Neighbor

gene id symbol gene type direction distance location
LOC110490742 LOC106609203 coding upstream 564 51411245 ~ 51730534 (+)
LOC110490271 LOC106576088 coding upstream 326697 51386269 ~ 51404401 (+)
atxn7l1 LOC106576087 coding upstream 348519 51351361 ~ 51382579 (+)
LOC118938813 NA coding upstream 364785 51364012 ~ 51366313 (+)
LOC110490270 LOC106576086 coding upstream 381252 51338069 ~ 51349846 (+)
LOC110490274 LOC106576108 coding downstream 333557 52064879 ~ 52074544 (+)
LOC110490275 LOC106576109 coding downstream 391264 52122586 ~ 52126305 (+)
LOC110490276 LOC106576110 coding downstream 422833 52154155 ~ 52176143 (+)
LOC110490280 LOC106609195 coding downstream 473503 52204825 ~ 52207709 (+)
LOC110490279 LOC106576114 coding downstream 588300 52319622 ~ 52327848 (+)
G1304083 NA non-coding upstream 78098 51584754 ~ 51653000 (+)
G1304108 NA non-coding upstream 138701 51591985 ~ 51592397 (+)
G1304085 NA non-coding upstream 140048 51585120 ~ 51591050 (+)
G1303964 NA non-coding upstream 149301 51320093 ~ 51581797 (+)
G1304100 NA non-coding upstream 159087 51571430 ~ 51572011 (+)
G1304635 NA non-coding downstream 517 51731839 ~ 51732077 (+)
G1304638 NA non-coding downstream 2520 51733842 ~ 51734068 (+)
G1304659 NA non-coding downstream 15329 51746651 ~ 51746889 (+)
G1304668 NA non-coding downstream 22450 51753772 ~ 51754011 (+)
G1304677 NA non-coding downstream 28068 51759390 ~ 51759677 (+)
G1303950 LOC106576084 other upstream 431337 51299403 ~ 51299761 (+)
G1303804 NA other upstream 657804 51071825 ~ 51073294 (+)
G1304886 NA other downstream 183275 51914597 ~ 51915010 (+)
G1305302 NA other downstream 781307 52512629 ~ 52513050 (+)
sox5 LOC106576150 other downstream 1621295 53352462 ~ 53471763 (+)
G1306708 NA other downstream 1849219 53580541 ~ 53583352 (+)
LOC110490314 LOC106576157 other downstream 2157906 53875911 ~ 53890829 (+)

Expression


Co-expression Network