Gene
RNA
| Item | Value |
|---|---|
| gene id | G1305434 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 52312736 ~ 52312953 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC109094915 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1489230 | True | 218 | lncRNA | 0.54 | 1 | 52312736 | 52312953 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118938894 | cog5 | coding | downstream | 33871 | 52208019 ~ 52278865 (-) |
| LOC110490278 | LOC106576113 | coding | downstream | 109640 | 52193062 ~ 52203096 (-) |
| LOC110490277 | LOC106576111 | coding | downstream | 128832 | 52179419 ~ 52183904 (-) |
| LOC110490745 | LOC106576126 | coding | downstream | 181698 | 52127987 ~ 52131038 (-) |
| LOC118936382 | NA | coding | downstream | 492885 | 51817108 ~ 51819851 (-) |
| LOC110490281 | NA | coding | upstream | 24818 | 52337771 ~ 52347933 (-) |
| slco1c1 | LOC106576120 | coding | upstream | 63059 | 52376012 ~ 52437134 (-) |
| LOC110490286 | LOC106576121 | coding | upstream | 147600 | 52460553 ~ 52545171 (-) |
| LOC118938978 | NA | coding | upstream | 296218 | 52609171 ~ 52609300 (-) |
| LOC110490287 | LOC106576122 | coding | upstream | 297772 | 52610725 ~ 52628311 (-) |
| G1305427 | NA | non-coding | downstream | 7558 | 52304920 ~ 52305178 (-) |
| G1305423 | NA | non-coding | downstream | 12285 | 52300174 ~ 52300451 (-) |
| G1305417 | NA | non-coding | downstream | 21191 | 52291273 ~ 52291545 (-) |
| G1305368 | NA | non-coding | downstream | 105036 | 52205393 ~ 52207700 (-) |
| G1305436 | NA | non-coding | upstream | 2200 | 52315153 ~ 52315374 (-) |
| G1305442 | NA | non-coding | upstream | 18469 | 52331422 ~ 52331734 (-) |
| G1305466 | NA | non-coding | upstream | 47167 | 52360120 ~ 52394173 (-) |
| G1305524 | NA | non-coding | upstream | 141781 | 52454734 ~ 52456997 (-) |
| G1305535 | NA | non-coding | upstream | 165496 | 52478449 ~ 52478723 (-) |
| G1304988 | NA | other | downstream | 322563 | 51989711 ~ 51990173 (-) |
| G1304896 | LOC107662719 | other | downstream | 390208 | 51921495 ~ 51922528 (-) |
| LOC110490744 | LOC106576129 | other | downstream | 519382 | 51785488 ~ 51793354 (-) |
| LOC110490264 | LOC106576080 | other | downstream | 1106875 | 51199223 ~ 51205927 (-) |
| LOC110490244 | LOC106609225 | other | downstream | 2011729 | 50290050 ~ 50301082 (-) |
| LOC110490288 | LOC106609184 | other | upstream | 494030 | 52630838 ~ 52809711 (-) |
| G1306232 | LOC106576137 | other | upstream | 741896 | 53054849 ~ 53062280 (-) |
| efcab6 | efcab6 | other | upstream | 1443562 | 53756479 ~ 53786697 (-) |
| G1307309 | NA | other | upstream | 1586357 | 53899310 ~ 53922128 (-) |
| G1307473 | NA | other | upstream | 1837091 | 54150044 ~ 54150540 (-) |
