G1305194


Basic Information

Item Value
gene id G1305194
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 52335249 ~ 52355427 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1488960
catcctccagcatgaccagtttggcggtgggtcagtcatggtgtggggtggcatttctttggggggccgcacagccctccatgtgctcgccagaggtagcctgactgccattaggtaccgagatgagatcctcagaccccttgtgagaccatatgctggtgcggttggccctgggttcctcgtaatgcaagacaatgctagacctcatgtggctggagtgt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1488960 True 221 lncRNA 0.57 2 52335249 52355427

Neighbor

gene id symbol gene type direction distance location
LOC110490279 LOC106576114 coding upstream 7401 52319622 ~ 52327848 (+)
LOC110490280 LOC106609195 coding upstream 127540 52204825 ~ 52207709 (+)
LOC110490276 LOC106576110 coding upstream 159106 52154155 ~ 52176143 (+)
LOC110490275 LOC106576109 coding upstream 208944 52122586 ~ 52126305 (+)
LOC110490274 LOC106576108 coding upstream 260705 52064879 ~ 52074544 (+)
LOC110490848 LOC106609256 coding downstream 610421 52965848 ~ 52968742 (+)
LOC110490290 LOC106609170 coding downstream 620185 52975612 ~ 53008441 (+)
LOC110490746 LOC106609171 coding downstream 653063 53008490 ~ 53021248 (+)
LOC110490293 LOC106609177 coding downstream 674209 53029636 ~ 53035717 (+)
LOC110490748 slc5a8 coding downstream 689922 53045349 ~ 53053406 (+)
G1305193 NA non-coding upstream 1017 52333644 ~ 52334232 (+)
G1305175 NA non-coding upstream 5627 52328726 ~ 52329622 (+)
G1305183 NA non-coding upstream 22350 52312683 ~ 52312899 (+)
G1305176 NA non-coding upstream 33027 52302004 ~ 52302222 (+)
G1305145 LOC106609192 non-coding upstream 96900 52213526 ~ 52238349 (+)
G1305268 NA non-coding downstream 98896 52454323 ~ 52456864 (+)
G1305273 LOC106576121 non-coding downstream 114162 52469589 ~ 52470240 (+)
G1305274 NA non-coding downstream 115308 52470735 ~ 52470992 (+)
G1305275 NA non-coding downstream 115901 52471328 ~ 52471559 (+)
G1305276 NA non-coding downstream 116165 52471592 ~ 52471864 (+)
G1304886 NA other upstream 420239 51914597 ~ 51915010 (+)
G1304083 NA other upstream 682249 51584754 ~ 51653000 (+)
LOC110490271 LOC106576088 other upstream 937287 51386269 ~ 51404401 (+)
atxn7l1 LOC106576087 other upstream 975762 51351361 ~ 51382579 (+)
G1303950 LOC106576084 other upstream 1035488 51299403 ~ 51299761 (+)
G1305302 NA other downstream 157202 52512629 ~ 52513050 (+)
sox5 LOC106576150 other downstream 997190 53352462 ~ 53471763 (+)
G1306708 NA other downstream 1225114 53580541 ~ 53583352 (+)
LOC110490314 LOC106576157 other downstream 1533801 53875911 ~ 53890829 (+)
LOC110490339 LOC106576184 other downstream 2802579 55157706 ~ 55170847 (+)

Expression


Co-expression Network