Gene
RNA
| Item | Value |
|---|---|
| gene id | G1305196 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 52347367 ~ 52347924 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1488962 | True | 467 | lncRNA | 0.43 | 2 | 52347367 | 52347924 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110490279 | LOC106576114 | coding | upstream | 19519 | 52319622 ~ 52327848 (+) |
| LOC110490280 | LOC106609195 | coding | upstream | 139658 | 52204825 ~ 52207709 (+) |
| LOC110490276 | LOC106576110 | coding | upstream | 171224 | 52154155 ~ 52176143 (+) |
| LOC110490275 | LOC106576109 | coding | upstream | 221062 | 52122586 ~ 52126305 (+) |
| LOC110490274 | LOC106576108 | coding | upstream | 272823 | 52064879 ~ 52074544 (+) |
| LOC110490283 | dus4l | coding | downstream | 200 | 52348124 ~ 52366962 (+) |
| LOC110490848 | LOC106609256 | coding | downstream | 617924 | 52965848 ~ 52968742 (+) |
| LOC110490290 | LOC106609170 | coding | downstream | 627688 | 52975612 ~ 53008441 (+) |
| LOC110490746 | LOC106609171 | coding | downstream | 660566 | 53008490 ~ 53021248 (+) |
| LOC110490293 | LOC106609177 | coding | downstream | 681712 | 53029636 ~ 53035717 (+) |
| G1305193 | NA | non-coding | upstream | 13135 | 52333644 ~ 52334232 (+) |
| G1305175 | NA | non-coding | upstream | 17745 | 52328726 ~ 52329622 (+) |
| G1305183 | NA | non-coding | upstream | 34468 | 52312683 ~ 52312899 (+) |
| G1305176 | NA | non-coding | upstream | 45145 | 52302004 ~ 52302222 (+) |
| G1305145 | LOC106609192 | non-coding | upstream | 109018 | 52213526 ~ 52238349 (+) |
| G1305268 | NA | non-coding | downstream | 106399 | 52454323 ~ 52456864 (+) |
| G1305273 | LOC106576121 | non-coding | downstream | 121665 | 52469589 ~ 52470240 (+) |
| G1305274 | NA | non-coding | downstream | 122811 | 52470735 ~ 52470992 (+) |
| G1305275 | NA | non-coding | downstream | 123404 | 52471328 ~ 52471559 (+) |
| G1305276 | NA | non-coding | downstream | 123668 | 52471592 ~ 52471864 (+) |
| G1304886 | NA | other | upstream | 432357 | 51914597 ~ 51915010 (+) |
| G1304083 | NA | other | upstream | 694367 | 51584754 ~ 51653000 (+) |
| LOC110490271 | LOC106576088 | other | upstream | 949405 | 51386269 ~ 51404401 (+) |
| atxn7l1 | LOC106576087 | other | upstream | 987880 | 51351361 ~ 51382579 (+) |
| G1303950 | LOC106576084 | other | upstream | 1047606 | 51299403 ~ 51299761 (+) |
| G1305302 | NA | other | downstream | 164705 | 52512629 ~ 52513050 (+) |
| sox5 | LOC106576150 | other | downstream | 1004693 | 53352462 ~ 53471763 (+) |
| G1306708 | NA | other | downstream | 1232617 | 53580541 ~ 53583352 (+) |
| LOC110490314 | LOC106576157 | other | downstream | 1541304 | 53875911 ~ 53890829 (+) |
| LOC110490339 | LOC106576184 | other | downstream | 2810082 | 55157706 ~ 55170847 (+) |
