Gene
RNA
| Item | Value |
|---|---|
| gene id | G1305274 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 52470735 ~ 52470992 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1489049 | True | 258 | lncRNA | 0.44 | 1 | 52470735 | 52470992 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110490283 | dus4l | coding | upstream | 103773 | 52348124 ~ 52366962 (+) |
| LOC110490279 | LOC106576114 | coding | upstream | 142887 | 52319622 ~ 52327848 (+) |
| LOC110490280 | LOC106609195 | coding | upstream | 263026 | 52204825 ~ 52207709 (+) |
| LOC110490276 | LOC106576110 | coding | upstream | 294592 | 52154155 ~ 52176143 (+) |
| LOC110490275 | LOC106576109 | coding | upstream | 344430 | 52122586 ~ 52126305 (+) |
| LOC110490848 | LOC106609256 | coding | downstream | 494856 | 52965848 ~ 52968742 (+) |
| LOC110490290 | LOC106609170 | coding | downstream | 504620 | 52975612 ~ 53008441 (+) |
| LOC110490746 | LOC106609171 | coding | downstream | 537498 | 53008490 ~ 53021248 (+) |
| LOC110490293 | LOC106609177 | coding | downstream | 558644 | 53029636 ~ 53035717 (+) |
| LOC110490748 | slc5a8 | coding | downstream | 574357 | 53045349 ~ 53053406 (+) |
| G1305273 | LOC106576121 | non-coding | upstream | 495 | 52469589 ~ 52470240 (+) |
| G1305268 | NA | non-coding | upstream | 13871 | 52454323 ~ 52456864 (+) |
| G1305194 | NA | non-coding | upstream | 115308 | 52335249 ~ 52355427 (+) |
| G1305196 | NA | non-coding | upstream | 122811 | 52347367 ~ 52347924 (+) |
| G1305193 | NA | non-coding | upstream | 136503 | 52333644 ~ 52334232 (+) |
| G1305275 | NA | non-coding | downstream | 336 | 52471328 ~ 52471559 (+) |
| G1305276 | NA | non-coding | downstream | 600 | 52471592 ~ 52471864 (+) |
| G1305279 | NA | non-coding | downstream | 7051 | 52478043 ~ 52478259 (+) |
| G1305281 | NA | non-coding | downstream | 8693 | 52479685 ~ 52479898 (+) |
| G1305285 | NA | non-coding | downstream | 14487 | 52485479 ~ 52485682 (+) |
| G1304886 | NA | other | upstream | 555725 | 51914597 ~ 51915010 (+) |
| G1304083 | NA | other | upstream | 817735 | 51584754 ~ 51653000 (+) |
| LOC110490271 | LOC106576088 | other | upstream | 1072773 | 51386269 ~ 51404401 (+) |
| atxn7l1 | LOC106576087 | other | upstream | 1111248 | 51351361 ~ 51382579 (+) |
| G1303950 | LOC106576084 | other | upstream | 1170974 | 51299403 ~ 51299761 (+) |
| G1305302 | NA | other | downstream | 41637 | 52512629 ~ 52513050 (+) |
| sox5 | LOC106576150 | other | downstream | 881625 | 53352462 ~ 53471763 (+) |
| G1306708 | NA | other | downstream | 1109549 | 53580541 ~ 53583352 (+) |
| LOC110490314 | LOC106576157 | other | downstream | 1418236 | 53875911 ~ 53890829 (+) |
| LOC110490339 | LOC106576184 | other | downstream | 2687014 | 55157706 ~ 55170847 (+) |
