G1305285


Basic Information

Item Value
gene id G1305285
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 52485479 ~ 52485682 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1489060
aggtgtgtgtgtcgCTGAGTGCCTGCAGAGGGCTGATTCGAGGCCGGTGCAGCGGCTGCAAACTGATCTGGGTACTGAGCAGGTTACTGACAGCCCGCAGGGAACTGCAGGTGTTGGGGGGCAGAGAGGGGTCCGCCAGCAGGTCTGAGATCAATCCATGGGCTTCCCCCATCACCGCTATGTCTACCAACACACTGGTGCCCG

Function

NR:

description
cGMP-inhibited 3',5'-cyclic phosphodiesterase A isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1489060 True 204 lncRNA 0.61 1 52485479 52485682

Neighbor

gene id symbol gene type direction distance location
LOC110490283 dus4l coding upstream 118517 52348124 ~ 52366962 (+)
LOC110490279 LOC106576114 coding upstream 157631 52319622 ~ 52327848 (+)
LOC110490280 LOC106609195 coding upstream 277770 52204825 ~ 52207709 (+)
LOC110490276 LOC106576110 coding upstream 309336 52154155 ~ 52176143 (+)
LOC110490275 LOC106576109 coding upstream 359174 52122586 ~ 52126305 (+)
LOC110490848 LOC106609256 coding downstream 480166 52965848 ~ 52968742 (+)
LOC110490290 LOC106609170 coding downstream 489930 52975612 ~ 53008441 (+)
LOC110490746 LOC106609171 coding downstream 522808 53008490 ~ 53021248 (+)
LOC110490293 LOC106609177 coding downstream 543954 53029636 ~ 53035717 (+)
LOC110490748 slc5a8 coding downstream 559667 53045349 ~ 53053406 (+)
G1305281 NA non-coding upstream 5581 52479685 ~ 52479898 (+)
G1305279 NA non-coding upstream 7220 52478043 ~ 52478259 (+)
G1305276 NA non-coding upstream 13615 52471592 ~ 52471864 (+)
G1305275 NA non-coding upstream 13920 52471328 ~ 52471559 (+)
G1305274 NA non-coding upstream 14487 52470735 ~ 52470992 (+)
G1305294 NA non-coding downstream 18159 52503841 ~ 52504107 (+)
G1305296 NA non-coding downstream 19715 52505397 ~ 52505665 (+)
G1305297 NA non-coding downstream 20222 52505904 ~ 52506104 (+)
G1305301 NA non-coding downstream 23807 52509489 ~ 52510149 (+)
G1305303 NA non-coding downstream 28245 52513927 ~ 52514259 (+)
G1304886 NA other upstream 570469 51914597 ~ 51915010 (+)
G1304083 NA other upstream 832479 51584754 ~ 51653000 (+)
LOC110490271 LOC106576088 other upstream 1087517 51386269 ~ 51404401 (+)
atxn7l1 LOC106576087 other upstream 1125992 51351361 ~ 51382579 (+)
G1303950 LOC106576084 other upstream 1185718 51299403 ~ 51299761 (+)
G1305302 NA other downstream 26947 52512629 ~ 52513050 (+)
sox5 LOC106576150 other downstream 866935 53352462 ~ 53471763 (+)
G1306708 NA other downstream 1094859 53580541 ~ 53583352 (+)
LOC110490314 LOC106576157 other downstream 1403546 53875911 ~ 53890829 (+)
LOC110490339 LOC106576184 other downstream 2672324 55157706 ~ 55170847 (+)

Expression


Co-expression Network