G1305303


Basic Information

Item Value
gene id G1305303
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 52513927 ~ 52514259 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1489078
gtcggaactagaagcacaagcatttcgctacactcgcattaacatctgctaaccatgtgtatgtgacaaataaaatttgatttgatttgatttcttcaGTATCTTGCTGGGTCTTTCTCTTCAGTATCTCGCTAGGTCTTTCTCTTCAGTATCTCGCTGggtctctctcttcagtatctcgctctctctcttcagtatctCGCTAGGTCTCTCTTcagtatctcgctctctctcttcagtatctcgctgggtctctctcttcagtatctcgctctctctcttcagtatctCGCTGGGTCTCTTTCTTCAGtatctcactcgctctctcttcaG

Function

NR:

description
LOW QUALITY PROTEIN: transcription and mRNA export factor ENY2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1489078 True 333 lncRNA 0.44 1 52513927 52514259

Neighbor

gene id symbol gene type direction distance location
LOC110490283 dus4l coding upstream 146965 52348124 ~ 52366962 (+)
LOC110490279 LOC106576114 coding upstream 186079 52319622 ~ 52327848 (+)
LOC110490280 LOC106609195 coding upstream 306218 52204825 ~ 52207709 (+)
LOC110490276 LOC106576110 coding upstream 337784 52154155 ~ 52176143 (+)
LOC110490275 LOC106576109 coding upstream 387622 52122586 ~ 52126305 (+)
LOC110490848 LOC106609256 coding downstream 451589 52965848 ~ 52968742 (+)
LOC110490290 LOC106609170 coding downstream 461353 52975612 ~ 53008441 (+)
LOC110490746 LOC106609171 coding downstream 494231 53008490 ~ 53021248 (+)
LOC110490293 LOC106609177 coding downstream 515377 53029636 ~ 53035717 (+)
LOC110490748 slc5a8 coding downstream 531090 53045349 ~ 53053406 (+)
G1305301 NA non-coding upstream 3778 52509489 ~ 52510149 (+)
G1305297 NA non-coding upstream 7823 52505904 ~ 52506104 (+)
G1305296 NA non-coding upstream 8262 52505397 ~ 52505665 (+)
G1305294 NA non-coding upstream 9820 52503841 ~ 52504107 (+)
G1305285 NA non-coding upstream 28245 52485479 ~ 52485682 (+)
G1305314 NA non-coding downstream 14604 52528863 ~ 52529126 (+)
G1305315 NA non-coding downstream 19994 52534253 ~ 52534571 (+)
G1305321 NA non-coding downstream 31080 52545339 ~ 52545647 (+)
G1305322 NA non-coding downstream 31538 52545797 ~ 52546065 (+)
G1305597 NA non-coding downstream 42844 52557103 ~ 52557355 (+)
G1305302 NA other upstream 877 52512629 ~ 52513050 (+)
G1304886 NA other upstream 598917 51914597 ~ 51915010 (+)
G1304083 NA other upstream 860927 51584754 ~ 51653000 (+)
LOC110490271 LOC106576088 other upstream 1115965 51386269 ~ 51404401 (+)
atxn7l1 LOC106576087 other upstream 1154440 51351361 ~ 51382579 (+)
sox5 LOC106576150 other downstream 838358 53352462 ~ 53471763 (+)
G1306708 NA other downstream 1066282 53580541 ~ 53583352 (+)
LOC110490314 LOC106576157 other downstream 1374969 53875911 ~ 53890829 (+)
LOC110490339 LOC106576184 other downstream 2643747 55157706 ~ 55170847 (+)
G1308238 NA other downstream 2748699 55262958 ~ 55278451 (+)

Expression


Co-expression Network