G1305315


Basic Information

Item Value
gene id G1305315
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 52534253 ~ 52534571 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1489090
aaacatctgcttcataagtcacataataagacgcaaggactcactctgtgtgcaataatatgacaatgactacctcatctccccacacagtaccacacacatacaattatctgtaaggtccctcagtcgagcagtgaatttaaaacacagattcaaccacaaagaccagggagggtttccaatgcctcacaaagaaggccTCCTATTGGTCgatgggtaaaaaataataaaagcagacattgaatatccctttgagcatggtgaagttattaattacactttggatggtgtatcaatacacccagtcactacaggaata

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1489090 True 319 lncRNA 0.40 1 52534253 52534571

Neighbor

gene id symbol gene type direction distance location
LOC110490283 dus4l coding upstream 167291 52348124 ~ 52366962 (+)
LOC110490279 LOC106576114 coding upstream 206405 52319622 ~ 52327848 (+)
LOC110490280 LOC106609195 coding upstream 326544 52204825 ~ 52207709 (+)
LOC110490276 LOC106576110 coding upstream 358110 52154155 ~ 52176143 (+)
LOC110490275 LOC106576109 coding upstream 407948 52122586 ~ 52126305 (+)
LOC110490848 LOC106609256 coding downstream 431277 52965848 ~ 52968742 (+)
LOC110490290 LOC106609170 coding downstream 441041 52975612 ~ 53008441 (+)
LOC110490746 LOC106609171 coding downstream 473919 53008490 ~ 53021248 (+)
LOC110490293 LOC106609177 coding downstream 495065 53029636 ~ 53035717 (+)
LOC110490748 slc5a8 coding downstream 510778 53045349 ~ 53053406 (+)
G1305314 NA non-coding upstream 5127 52528863 ~ 52529126 (+)
G1305303 NA non-coding upstream 19994 52513927 ~ 52514259 (+)
G1305301 NA non-coding upstream 24104 52509489 ~ 52510149 (+)
G1305297 NA non-coding upstream 28149 52505904 ~ 52506104 (+)
G1305296 NA non-coding upstream 28588 52505397 ~ 52505665 (+)
G1305321 NA non-coding downstream 10768 52545339 ~ 52545647 (+)
G1305322 NA non-coding downstream 11226 52545797 ~ 52546065 (+)
G1305597 NA non-coding downstream 22532 52557103 ~ 52557355 (+)
G1305643 NA non-coding downstream 55880 52590451 ~ 52590940 (+)
G1305645 NA non-coding downstream 57078 52591649 ~ 52591908 (+)
G1305302 NA other upstream 21203 52512629 ~ 52513050 (+)
G1304886 NA other upstream 619243 51914597 ~ 51915010 (+)
G1304083 NA other upstream 881253 51584754 ~ 51653000 (+)
LOC110490271 LOC106576088 other upstream 1136291 51386269 ~ 51404401 (+)
atxn7l1 LOC106576087 other upstream 1174766 51351361 ~ 51382579 (+)
sox5 LOC106576150 other downstream 818046 53352462 ~ 53471763 (+)
G1306708 NA other downstream 1045970 53580541 ~ 53583352 (+)
LOC110490314 LOC106576157 other downstream 1354657 53875911 ~ 53890829 (+)
LOC110490339 LOC106576184 other downstream 2623435 55157706 ~ 55170847 (+)
G1308238 NA other downstream 2728387 55262958 ~ 55278451 (+)

Expression


Co-expression Network