Gene
RNA
| Item | Value |
|---|---|
| gene id | G1305585 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 52539767 ~ 52539997 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| nucleotide-binding oligomerization domain-containing protein 2 isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1489409 | True | 231 | lncRNA | 0.34 | 1 | 52539767 | 52539997 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| slco1c1 | LOC106576120 | coding | downstream | 102633 | 52376012 ~ 52437134 (-) |
| LOC110490281 | NA | coding | downstream | 191834 | 52337771 ~ 52347933 (-) |
| LOC118938894 | cog5 | coding | downstream | 260902 | 52208019 ~ 52278865 (-) |
| LOC110490278 | LOC106576113 | coding | downstream | 336671 | 52193062 ~ 52203096 (-) |
| LOC110490277 | LOC106576111 | coding | downstream | 355863 | 52179419 ~ 52183904 (-) |
| LOC118938978 | NA | coding | upstream | 69174 | 52609171 ~ 52609300 (-) |
| LOC110490287 | LOC106576122 | coding | upstream | 70728 | 52610725 ~ 52628311 (-) |
| LOC110490288 | LOC106609184 | coding | upstream | 90841 | 52630838 ~ 52809711 (-) |
| LOC110490289 | NA | coding | upstream | 113377 | 52653374 ~ 52656938 (-) |
| LOC110490291 | LOC106609175 | coding | upstream | 481274 | 53021271 ~ 53029431 (-) |
| G1305584 | NA | non-coding | downstream | 790 | 52538637 ~ 52538977 (-) |
| G1305583 | NA | non-coding | downstream | 2316 | 52537229 ~ 52537451 (-) |
| G1305575 | NA | non-coding | downstream | 10251 | 52529240 ~ 52529516 (-) |
| G1305574 | NA | non-coding | downstream | 10686 | 52528861 ~ 52529081 (-) |
| G1305573 | NA | non-coding | downstream | 11046 | 52528517 ~ 52528721 (-) |
| G1305595 | NA | non-coding | upstream | 15511 | 52555508 ~ 52555733 (-) |
| G1305653 | NA | non-coding | upstream | 56622 | 52596619 ~ 52596826 (-) |
| G1305655 | NA | non-coding | upstream | 57709 | 52597706 ~ 52597949 (-) |
| G1305802 | NA | non-coding | upstream | 67122 | 52607119 ~ 52607464 (-) |
| G1305800 | NA | non-coding | upstream | 69399 | 52609396 ~ 52707243 (-) |
| G1304988 | NA | other | downstream | 549594 | 51989711 ~ 51990173 (-) |
| G1304896 | LOC107662719 | other | downstream | 617239 | 51921495 ~ 51922528 (-) |
| LOC110490744 | LOC106576129 | other | downstream | 746413 | 51785488 ~ 51793354 (-) |
| LOC110490264 | LOC106576080 | other | downstream | 1333906 | 51199223 ~ 51205927 (-) |
| LOC110490244 | LOC106609225 | other | downstream | 2238760 | 50290050 ~ 50301082 (-) |
| G1306232 | LOC106576137 | other | upstream | 514852 | 53054849 ~ 53062280 (-) |
| efcab6 | efcab6 | other | upstream | 1216518 | 53756479 ~ 53786697 (-) |
| G1307309 | NA | other | upstream | 1359313 | 53899310 ~ 53922128 (-) |
| G1307473 | NA | other | upstream | 1610047 | 54150044 ~ 54150540 (-) |
