Gene
RNA
| Item | Value |
|---|---|
| gene id | G1305322 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 52545797 ~ 52546065 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1489097 | True | 269 | lncRNA | 0.41 | 1 | 52545797 | 52546065 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110490283 | dus4l | coding | upstream | 178835 | 52348124 ~ 52366962 (+) |
| LOC110490279 | LOC106576114 | coding | upstream | 217949 | 52319622 ~ 52327848 (+) |
| LOC110490280 | LOC106609195 | coding | upstream | 338088 | 52204825 ~ 52207709 (+) |
| LOC110490276 | LOC106576110 | coding | upstream | 369654 | 52154155 ~ 52176143 (+) |
| LOC110490275 | LOC106576109 | coding | upstream | 419492 | 52122586 ~ 52126305 (+) |
| LOC110490848 | LOC106609256 | coding | downstream | 419783 | 52965848 ~ 52968742 (+) |
| LOC110490290 | LOC106609170 | coding | downstream | 429547 | 52975612 ~ 53008441 (+) |
| LOC110490746 | LOC106609171 | coding | downstream | 462425 | 53008490 ~ 53021248 (+) |
| LOC110490293 | LOC106609177 | coding | downstream | 483571 | 53029636 ~ 53035717 (+) |
| LOC110490748 | slc5a8 | coding | downstream | 499284 | 53045349 ~ 53053406 (+) |
| G1305321 | NA | non-coding | upstream | 150 | 52545339 ~ 52545647 (+) |
| G1305315 | NA | non-coding | upstream | 11226 | 52534253 ~ 52534571 (+) |
| G1305314 | NA | non-coding | upstream | 16671 | 52528863 ~ 52529126 (+) |
| G1305303 | NA | non-coding | upstream | 31538 | 52513927 ~ 52514259 (+) |
| G1305301 | NA | non-coding | upstream | 35648 | 52509489 ~ 52510149 (+) |
| G1305597 | NA | non-coding | downstream | 11038 | 52557103 ~ 52557355 (+) |
| G1305643 | NA | non-coding | downstream | 44386 | 52590451 ~ 52590940 (+) |
| G1305645 | NA | non-coding | downstream | 45584 | 52591649 ~ 52591908 (+) |
| G1305646 | NA | non-coding | downstream | 46558 | 52592623 ~ 52592825 (+) |
| G1305657 | NA | non-coding | downstream | 53954 | 52600019 ~ 52600360 (+) |
| G1305302 | NA | other | upstream | 32747 | 52512629 ~ 52513050 (+) |
| G1304886 | NA | other | upstream | 630787 | 51914597 ~ 51915010 (+) |
| G1304083 | NA | other | upstream | 892797 | 51584754 ~ 51653000 (+) |
| LOC110490271 | LOC106576088 | other | upstream | 1147835 | 51386269 ~ 51404401 (+) |
| atxn7l1 | LOC106576087 | other | upstream | 1186310 | 51351361 ~ 51382579 (+) |
| sox5 | LOC106576150 | other | downstream | 806552 | 53352462 ~ 53471763 (+) |
| G1306708 | NA | other | downstream | 1034476 | 53580541 ~ 53583352 (+) |
| LOC110490314 | LOC106576157 | other | downstream | 1343163 | 53875911 ~ 53890829 (+) |
| LOC110490339 | LOC106576184 | other | downstream | 2611941 | 55157706 ~ 55170847 (+) |
| G1308238 | NA | other | downstream | 2716893 | 55262958 ~ 55278451 (+) |
