G1305645


Basic Information

Item Value
gene id G1305645
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 52591649 ~ 52591908 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1489474
tggggatggtgtgttcagctgtgttgcttttacgccaaacataacgttttgcattgttgccaaaaagttcaattttggtttcatctgaccagagcaccttcttccacatgtttggtgtgtctcccaggtggcttgtggcaacctttaaacaacactttttatggatatctttaagaaatggctttcttgccactcttccataaaggccagatttgtgcaatatacgactgattgttgtcctatggacagagtctcccacc

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1489474 True 260 lncRNA 0.43 1 52591649 52591908

Neighbor

gene id symbol gene type direction distance location
LOC110490283 dus4l coding upstream 224687 52348124 ~ 52366962 (+)
LOC110490279 LOC106576114 coding upstream 263801 52319622 ~ 52327848 (+)
LOC110490280 LOC106609195 coding upstream 383940 52204825 ~ 52207709 (+)
LOC110490276 LOC106576110 coding upstream 415506 52154155 ~ 52176143 (+)
LOC110490275 LOC106576109 coding upstream 465344 52122586 ~ 52126305 (+)
LOC110490848 LOC106609256 coding downstream 373940 52965848 ~ 52968742 (+)
LOC110490290 LOC106609170 coding downstream 383704 52975612 ~ 53008441 (+)
LOC110490746 LOC106609171 coding downstream 416582 53008490 ~ 53021248 (+)
LOC110490293 LOC106609177 coding downstream 437728 53029636 ~ 53035717 (+)
LOC110490748 slc5a8 coding downstream 453441 53045349 ~ 53053406 (+)
G1305643 NA non-coding upstream 709 52590451 ~ 52590940 (+)
G1305597 NA non-coding upstream 34294 52557103 ~ 52557355 (+)
G1305322 NA non-coding upstream 45584 52545797 ~ 52546065 (+)
G1305321 NA non-coding upstream 46002 52545339 ~ 52545647 (+)
G1305315 NA non-coding upstream 57078 52534253 ~ 52534571 (+)
G1305646 NA non-coding downstream 715 52592623 ~ 52592825 (+)
G1305657 NA non-coding downstream 8111 52600019 ~ 52600360 (+)
G1305662 NA non-coding downstream 11022 52602930 ~ 52603159 (+)
G1305666 NA non-coding downstream 17527 52609435 ~ 52707235 (+)
G1305682 NA non-coding downstream 43720 52635628 ~ 52636168 (+)
G1305302 NA other upstream 78599 52512629 ~ 52513050 (+)
G1304886 NA other upstream 676639 51914597 ~ 51915010 (+)
G1304083 NA other upstream 938649 51584754 ~ 51653000 (+)
LOC110490271 LOC106576088 other upstream 1193687 51386269 ~ 51404401 (+)
atxn7l1 LOC106576087 other upstream 1232162 51351361 ~ 51382579 (+)
sox5 LOC106576150 other downstream 760709 53352462 ~ 53471763 (+)
G1306708 NA other downstream 988633 53580541 ~ 53583352 (+)
LOC110490314 LOC106576157 other downstream 1297320 53875911 ~ 53890829 (+)
LOC110490339 LOC106576184 other downstream 2566098 55157706 ~ 55170847 (+)
G1308238 NA other downstream 2671050 55262958 ~ 55278451 (+)

Expression


Co-expression Network