Gene
RNA
| Item | Value |
|---|---|
| gene id | G1305821 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 52630412 ~ 52672735 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1489675 | True | 382 | lncRNA | 0.48 | 2 | 52630412 | 52672735 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110490287 | LOC106576122 | coding | downstream | 2101 | 52610725 ~ 52628311 (-) |
| LOC118938978 | NA | coding | downstream | 21112 | 52609171 ~ 52609300 (-) |
| LOC110490286 | LOC106576121 | coding | downstream | 85241 | 52460553 ~ 52545171 (-) |
| slco1c1 | LOC106576120 | coding | downstream | 193278 | 52376012 ~ 52437134 (-) |
| LOC110490281 | NA | coding | downstream | 282479 | 52337771 ~ 52347933 (-) |
| LOC110490291 | LOC106609175 | coding | upstream | 348536 | 53021271 ~ 53029431 (-) |
| LOC110490294 | utp20 | coding | upstream | 362916 | 53034589 ~ 53040657 (-) |
| LOC118938980 | NA | coding | upstream | 364597 | 53037332 ~ 53037459 (-) |
| LOC110490297 | LOC106576136 | coding | upstream | 382111 | 53054846 ~ 53062315 (-) |
| LOC110490299 | LOC106576137 | coding | upstream | 388215 | 53060950 ~ 53062801 (-) |
| G1305802 | NA | non-coding | downstream | 22948 | 52607119 ~ 52607464 (-) |
| G1305655 | NA | non-coding | downstream | 32463 | 52597706 ~ 52597949 (-) |
| G1305653 | NA | non-coding | downstream | 33586 | 52596619 ~ 52596826 (-) |
| G1305595 | NA | non-coding | downstream | 74679 | 52555508 ~ 52555733 (-) |
| G1305585 | NA | non-coding | downstream | 90415 | 52539767 ~ 52539997 (-) |
| G1305845 | NA | non-coding | upstream | 21223 | 52693958 ~ 52695698 (-) |
| LOC110490288 | LOC106609184 | non-coding | upstream | 63846 | 52630838 ~ 52809711 (-) |
| G1305873 | NA | non-coding | upstream | 69430 | 52742165 ~ 52742559 (-) |
| G1305881 | NA | non-coding | upstream | 81967 | 52754702 ~ 52755086 (-) |
| G1305897 | NA | non-coding | upstream | 145073 | 52817808 ~ 52818188 (-) |
| G1304988 | NA | other | downstream | 640239 | 51989711 ~ 51990173 (-) |
| G1304896 | LOC107662719 | other | downstream | 707884 | 51921495 ~ 51922528 (-) |
| LOC110490744 | LOC106576129 | other | downstream | 837058 | 51785488 ~ 51793354 (-) |
| LOC110490264 | LOC106576080 | other | downstream | 1424551 | 51199223 ~ 51205927 (-) |
| LOC110490244 | LOC106609225 | other | downstream | 2329405 | 50290050 ~ 50301082 (-) |
| G1306232 | LOC106576137 | other | upstream | 382114 | 53054849 ~ 53062280 (-) |
| efcab6 | efcab6 | other | upstream | 1083780 | 53756479 ~ 53786697 (-) |
| G1307309 | NA | other | upstream | 1226575 | 53899310 ~ 53922128 (-) |
| G1307473 | NA | other | upstream | 1477309 | 54150044 ~ 54150540 (-) |
