Gene
RNA
| Item | Value |
|---|---|
| gene id | G1305873 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 52742165 ~ 52742559 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1489728 | True | 218 | lncRNA | 0.46 | 2 | 52742165 | 52742559 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110490289 | NA | coding | downstream | 85227 | 52653374 ~ 52656938 (-) |
| LOC110490287 | LOC106576122 | coding | downstream | 113854 | 52610725 ~ 52628311 (-) |
| LOC118938978 | NA | coding | downstream | 132865 | 52609171 ~ 52609300 (-) |
| LOC110490286 | LOC106576121 | coding | downstream | 196994 | 52460553 ~ 52545171 (-) |
| slco1c1 | LOC106576120 | coding | downstream | 305031 | 52376012 ~ 52437134 (-) |
| LOC110490291 | LOC106609175 | coding | upstream | 278712 | 53021271 ~ 53029431 (-) |
| LOC110490294 | utp20 | coding | upstream | 293092 | 53034589 ~ 53040657 (-) |
| LOC118938980 | NA | coding | upstream | 294773 | 53037332 ~ 53037459 (-) |
| LOC110490297 | LOC106576136 | coding | upstream | 312287 | 53054846 ~ 53062315 (-) |
| LOC110490299 | LOC106576137 | coding | upstream | 318391 | 53060950 ~ 53062801 (-) |
| G1305800 | NA | non-coding | downstream | 34922 | 52609396 ~ 52707243 (-) |
| G1305845 | NA | non-coding | downstream | 46467 | 52693958 ~ 52695698 (-) |
| G1305821 | NA | non-coding | downstream | 69430 | 52630412 ~ 52672735 (-) |
| G1305802 | NA | non-coding | downstream | 134701 | 52607119 ~ 52607464 (-) |
| G1305655 | NA | non-coding | downstream | 144216 | 52597706 ~ 52597949 (-) |
| G1305881 | NA | non-coding | upstream | 12143 | 52754702 ~ 52755086 (-) |
| G1305897 | NA | non-coding | upstream | 75249 | 52817808 ~ 52818188 (-) |
| G1305898 | NA | non-coding | upstream | 76742 | 52819301 ~ 52819553 (-) |
| G1305899 | NA | non-coding | upstream | 78509 | 52821068 ~ 52821386 (-) |
| G1306187 | NA | non-coding | upstream | 222684 | 52965243 ~ 52965773 (-) |
| G1304988 | NA | other | downstream | 751992 | 51989711 ~ 51990173 (-) |
| G1304896 | LOC107662719 | other | downstream | 819637 | 51921495 ~ 51922528 (-) |
| LOC110490744 | LOC106576129 | other | downstream | 948811 | 51785488 ~ 51793354 (-) |
| LOC110490264 | LOC106576080 | other | downstream | 1536304 | 51199223 ~ 51205927 (-) |
| LOC110490244 | LOC106609225 | other | downstream | 2441158 | 50290050 ~ 50301082 (-) |
| LOC110490288 | LOC106609184 | other | upstream | 64424 | 52630838 ~ 52809711 (-) |
| G1306232 | LOC106576137 | other | upstream | 312290 | 53054849 ~ 53062280 (-) |
| efcab6 | efcab6 | other | upstream | 1013956 | 53756479 ~ 53786697 (-) |
| G1307309 | NA | other | upstream | 1156751 | 53899310 ~ 53922128 (-) |
| G1307473 | NA | other | upstream | 1407485 | 54150044 ~ 54150540 (-) |
