G1306187


Basic Information

Item Value
gene id G1306187
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 52965243 ~ 52965773 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1490060
tctcttgctctatcgctctctctttgtctctctctgtctctctctctctctctctctttgtctctctctctctcgctctcttgctctatcactctctctttgtctttgtctgtctctgtctctctctatctctctctctctctctctctctttgtctctctctctctctctctctctctctctgtctctctctctcgctctcttgctctatcactctctct
>TU1490061
ctctttgtctctctctctccctctccttgtctctttctctttgtctctctctctctcttgctctatcgctctctctttgtctctctctctctttgtctctctctctctctttgtctctctctctctctttgtctctctctctctctcgctctcttgctctatcgctctctctttgtctttctctgtctctgtctctctctctctctctctctttgtctctctctctctcgctctcttgctctatcactctctctttgtctttgtctgtctctgtctctctctatctctctctctctctctctctctttgtctctctctctctctctctctctctctctgtctctctctctcgctctcttgctctatcactctctct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1490060 False 221 lncRNA 0.47 4 52965243 52965773
TU1490061 True 376 lncRNA 0.47 3 52965243 52965710

Neighbor

gene id symbol gene type direction distance location
LOC110490288 LOC106609184 coding downstream 155532 52630838 ~ 52809711 (-)
LOC110490289 NA coding downstream 308305 52653374 ~ 52656938 (-)
LOC110490287 LOC106576122 coding downstream 336932 52610725 ~ 52628311 (-)
LOC118938978 NA coding downstream 355943 52609171 ~ 52609300 (-)
LOC110490286 LOC106576121 coding downstream 420072 52460553 ~ 52545171 (-)
LOC110490291 LOC106609175 coding upstream 55498 53021271 ~ 53029431 (-)
LOC110490294 utp20 coding upstream 69878 53034589 ~ 53040657 (-)
LOC118938980 NA coding upstream 71559 53037332 ~ 53037459 (-)
LOC110490297 LOC106576136 coding upstream 89073 53054846 ~ 53062315 (-)
LOC110490299 LOC106576137 coding upstream 95177 53060950 ~ 53062801 (-)
G1305899 NA non-coding downstream 143857 52821068 ~ 52821386 (-)
G1305898 NA non-coding downstream 145690 52819301 ~ 52819553 (-)
G1305897 NA non-coding downstream 147055 52817808 ~ 52818188 (-)
G1306192 NA non-coding upstream 9973 52975746 ~ 52976309 (-)
G1306198 NA non-coding upstream 12738 52978511 ~ 52978799 (-)
G1306195 NA non-coding upstream 40753 53006526 ~ 53008889 (-)
G1306216 NA non-coding upstream 47170 53012943 ~ 53013798 (-)
G1306217 LOC106609171 non-coding upstream 48129 53013902 ~ 53014437 (-)
G1304988 NA other downstream 975070 51989711 ~ 51990173 (-)
G1304896 LOC107662719 other downstream 1042715 51921495 ~ 51922528 (-)
LOC110490744 LOC106576129 other downstream 1171889 51785488 ~ 51793354 (-)
LOC110490264 LOC106576080 other downstream 1759382 51199223 ~ 51205927 (-)
G1306232 LOC106576137 other upstream 89076 53054849 ~ 53062280 (-)
efcab6 efcab6 other upstream 790742 53756479 ~ 53786697 (-)
G1307309 NA other upstream 933537 53899310 ~ 53922128 (-)
G1307473 NA other upstream 1184271 54150044 ~ 54150540 (-)
G1307901 NA other upstream 1801199 54766972 ~ 54768422 (-)

Expression


Co-expression Network