G1306192


Basic Information

Item Value
gene id G1306192
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 52975746 ~ 52976309 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1490068
TCCAGCTCCTGTCGGAGCGCCTCTTGCTCGGCCTCTAGATCCGAATATTGCTGCTTCAGGGTCTGGTTCTCCTCCAGAACCACCAGACCGCACTCCGCAGCCCGGACCTTCTCCCGGTTCGCCTCCGCTAGCTCACGGGTCAAACGCTCCACCTCTGCCCGGCACTGCTCCACCGTGTCCCCGCATCCTCCTCCAGCAGCCAtcgccctccctctcctctcttccccttctctcctctccgccCCTGCGTCAGATGGGCAGAGAAGCGAAGGAAGAAAACAGATGTAGCCTACCGGACAACAATCTCCTCACCTCCTTCGTTGGAAGGAATCAACCGAGGAGTTTAAAAACGCATGAAAAGGGCGTTAACATCCCCGGAGCGAAATGATTGTGAAAGAGAGATGAATCCCTCCATAGCTGATGTGTTGAATTGAACGGTTTCCCCTCTAGGCGTAGGGTCCAGCATCATCCCCTTTCCTCTTCTTTTTTTGCTTATTCATCGGGATGCGGACGCCATCTCTCTATTGCCATGAAGCAGCGGCAAGGTACACGCAACTCTCGCCC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1490068 True 564 lncRNA 0.56 1 52975746 52976309

Neighbor

gene id symbol gene type direction distance location
LOC110490288 LOC106609184 coding downstream 166035 52630838 ~ 52809711 (-)
LOC110490289 NA coding downstream 318808 52653374 ~ 52656938 (-)
LOC110490287 LOC106576122 coding downstream 347435 52610725 ~ 52628311 (-)
LOC118938978 NA coding downstream 366446 52609171 ~ 52609300 (-)
LOC110490286 LOC106576121 coding downstream 430575 52460553 ~ 52545171 (-)
LOC110490291 LOC106609175 coding upstream 44962 53021271 ~ 53029431 (-)
LOC110490294 utp20 coding upstream 59342 53034589 ~ 53040657 (-)
LOC118938980 NA coding upstream 61023 53037332 ~ 53037459 (-)
LOC110490297 LOC106576136 coding upstream 78537 53054846 ~ 53062315 (-)
LOC110490299 LOC106576137 coding upstream 84641 53060950 ~ 53062801 (-)
G1306187 NA non-coding downstream 9973 52965243 ~ 52965773 (-)
G1305899 NA non-coding downstream 154360 52821068 ~ 52821386 (-)
G1305898 NA non-coding downstream 156193 52819301 ~ 52819553 (-)
G1305897 NA non-coding downstream 157558 52817808 ~ 52818188 (-)
G1305881 NA non-coding downstream 220660 52754702 ~ 52755086 (-)
G1306198 NA non-coding upstream 2202 52978511 ~ 52978799 (-)
G1306195 NA non-coding upstream 30217 53006526 ~ 53008889 (-)
G1306216 NA non-coding upstream 36634 53012943 ~ 53013798 (-)
G1306217 LOC106609171 non-coding upstream 37593 53013902 ~ 53014437 (-)
G1306222 LOC106609171 non-coding upstream 40324 53016633 ~ 53017896 (-)
G1304988 NA other downstream 985573 51989711 ~ 51990173 (-)
G1304896 LOC107662719 other downstream 1053218 51921495 ~ 51922528 (-)
LOC110490744 LOC106576129 other downstream 1182392 51785488 ~ 51793354 (-)
LOC110490264 LOC106576080 other downstream 1769885 51199223 ~ 51205927 (-)
G1306232 LOC106576137 other upstream 78540 53054849 ~ 53062280 (-)
efcab6 efcab6 other upstream 780206 53756479 ~ 53786697 (-)
G1307309 NA other upstream 923001 53899310 ~ 53922128 (-)
G1307473 NA other upstream 1173735 54150044 ~ 54150540 (-)
G1307901 NA other upstream 1790663 54766972 ~ 54768422 (-)

Expression


Co-expression Network