Gene
RNA
| Item | Value |
|---|---|
| gene id | G1306217 |
| gene name | LOC106609171 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 53013902 ~ 53014437 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| FYVE, RhoGEF and PH domain-containing protein 4-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1490099 | True | 311 | lncRNA | 0.56 | 2 | 53013902 | 53014437 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110490288 | LOC106609184 | coding | downstream | 204191 | 52630838 ~ 52809711 (-) |
| LOC110490289 | NA | coding | downstream | 356964 | 52653374 ~ 52656938 (-) |
| LOC110490287 | LOC106576122 | coding | downstream | 385591 | 52610725 ~ 52628311 (-) |
| LOC118938978 | NA | coding | downstream | 404602 | 52609171 ~ 52609300 (-) |
| LOC110490286 | LOC106576121 | coding | downstream | 468731 | 52460553 ~ 52545171 (-) |
| LOC110490291 | LOC106609175 | coding | upstream | 6834 | 53021271 ~ 53029431 (-) |
| LOC110490294 | utp20 | coding | upstream | 21214 | 53034589 ~ 53040657 (-) |
| LOC118938980 | NA | coding | upstream | 22895 | 53037332 ~ 53037459 (-) |
| LOC110490297 | LOC106576136 | coding | upstream | 40409 | 53054846 ~ 53062315 (-) |
| LOC110490299 | LOC106576137 | coding | upstream | 46513 | 53060950 ~ 53062801 (-) |
| G1306216 | NA | non-coding | downstream | 104 | 53012943 ~ 53013798 (-) |
| G1306195 | NA | non-coding | downstream | 5013 | 53006526 ~ 53008889 (-) |
| G1306198 | NA | non-coding | downstream | 35103 | 52978511 ~ 52978799 (-) |
| G1306192 | NA | non-coding | downstream | 37593 | 52975746 ~ 52976309 (-) |
| G1306187 | NA | non-coding | downstream | 48129 | 52965243 ~ 52965773 (-) |
| G1306222 | LOC106609171 | non-coding | upstream | 2196 | 53016633 ~ 53017896 (-) |
| G1306233 | NA | non-coding | upstream | 42986 | 53057423 ~ 53150195 (-) |
| G1306242 | NA | non-coding | upstream | 60756 | 53075193 ~ 53142075 (-) |
| G1306283 | NA | non-coding | upstream | 140178 | 53154615 ~ 53155065 (-) |
| G1304988 | NA | other | downstream | 1023729 | 51989711 ~ 51990173 (-) |
| G1304896 | LOC107662719 | other | downstream | 1091374 | 51921495 ~ 51922528 (-) |
| LOC110490744 | LOC106576129 | other | downstream | 1220548 | 51785488 ~ 51793354 (-) |
| LOC110490264 | LOC106576080 | other | downstream | 1808041 | 51199223 ~ 51205927 (-) |
| G1306232 | LOC106576137 | other | upstream | 40412 | 53054849 ~ 53062280 (-) |
| efcab6 | efcab6 | other | upstream | 742078 | 53756479 ~ 53786697 (-) |
| G1307309 | NA | other | upstream | 884873 | 53899310 ~ 53922128 (-) |
| G1307473 | NA | other | upstream | 1135607 | 54150044 ~ 54150540 (-) |
| G1307901 | NA | other | upstream | 1752535 | 54766972 ~ 54768422 (-) |
