G1306314


Basic Information

Item Value
gene id G1306314
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 53197708 ~ 53198024 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1490298
gatctgtcacatgatctcaaagatgtggagaagtacagatcagggttgggttataaaaaaatatctgaaactttgaacatcccacggagcaccattaaatccattattaaaaaatggaaagaatatggcacctcaacaaacctgccaagagagggccacccaccaaaactcacggaccaggcaaggggggcattaatcagag

Function

NR:

description
PREDICTED: high mobility group protein B2 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1490298 True 202 lncRNA 0.43 2 53197708 53198024

Neighbor

gene id symbol gene type direction distance location
bcat1 LOC106576140 coding upstream 55917 53114950 ~ 53141791 (+)
cfap94 casc1 coding upstream 111548 53077695 ~ 53086160 (+)
LOC110490748 slc5a8 coding upstream 144302 53045349 ~ 53053406 (+)
LOC110490293 LOC106609177 coding upstream 161991 53029636 ~ 53035717 (+)
LOC110490746 LOC106609171 coding upstream 176460 53008490 ~ 53021248 (+)
sox5 LOC106576150 coding downstream 154724 53352462 ~ 53471763 (+)
c15h12orf45 LOC106609327 coding downstream 354174 53552198 ~ 53554958 (+)
scube1 LOC106576154 coding downstream 387035 53585059 ~ 53728823 (+)
trnak-cuu-7 NA coding downstream 502272 53700296 ~ 53700368 (+)
mpped1 LOC106576156 coding downstream 508444 53706468 ~ 53755855 (+)
G1306098 NA non-coding upstream 63626 53133541 ~ 53134082 (+)
G1306082 NA non-coding upstream 92844 53102181 ~ 53104864 (+)
G1306076 LOC106576138 non-coding upstream 103274 53093768 ~ 53094434 (+)
G1306034 NA non-coding upstream 211825 52985607 ~ 52985883 (+)
G1306030 NA non-coding upstream 217509 52979918 ~ 52980199 (+)
G1306321 NA non-coding downstream 14674 53212698 ~ 53212935 (+)
G1306339 NA non-coding downstream 41736 53239760 ~ 53240049 (+)
G1306340 NA non-coding downstream 42191 53240215 ~ 53246748 (+)
G1306342 NA non-coding downstream 49736 53247760 ~ 53248214 (+)
G1306344 NA non-coding downstream 51637 53249661 ~ 53249944 (+)
G1305302 NA other upstream 684658 52512629 ~ 52513050 (+)
G1304886 NA other upstream 1282698 51914597 ~ 51915010 (+)
G1304083 NA other upstream 1544708 51584754 ~ 51653000 (+)
LOC110490271 LOC106576088 other upstream 1799746 51386269 ~ 51404401 (+)
atxn7l1 LOC106576087 other upstream 1838221 51351361 ~ 51382579 (+)
G1306708 NA other downstream 382517 53580541 ~ 53583352 (+)
LOC110490314 LOC106576157 other downstream 691204 53875911 ~ 53890829 (+)
LOC110490339 LOC106576184 other downstream 1959982 55157706 ~ 55170847 (+)
G1308238 NA other downstream 2064934 55262958 ~ 55278451 (+)

Expression


Co-expression Network