G1306552


Basic Information

Item Value
gene id G1306552
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 53248191 ~ 53248700 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1490552
gagatggtagtgtggtggtagacagagagatggtagtgtggtggtggtagacagagagatggtagtgtggtggtagacagagagatggtagtgtggtggtggtagacagagagatggtagtgtggtggtagacagagagatggtagtgtggtggtggtagacagagagttggtagtgtggtggtagacagagagatggtagtgtggtggtagacagagagatggtagtgtggtggtggtagacagagagatggtagtgtggcggtggacagagagatggtagtgtggtggtggtagtcagagagatggtagtgtggtggtagacagagagatggtagtgtggtggtggtagacagagagatggtagtgtggcggtggacagagagatggtagtgtggtggtagacagagagatggtagtgtggtggtagacagagagatggtagtgtggtggtagacagagagatggtagtgtggtggtggtagacagagagatggtagtgtggtggtgg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1490552 True 510 lncRNA 0.52 1 53248191 53248700

Neighbor

gene id symbol gene type direction distance location
lrmp LOC106576138 coding downstream 138981 53085647 ~ 53109210 (-)
LOC110490299 LOC106576137 coding downstream 185390 53060950 ~ 53062801 (-)
LOC110490297 LOC106576136 coding downstream 185876 53054846 ~ 53062315 (-)
LOC110490294 utp20 coding downstream 207534 53034589 ~ 53040657 (-)
etnk1 LOC106609326 coding upstream 279521 53528016 ~ 53548231 (-)
aldh1l2 LOC106576152 coding upstream 306338 53555038 ~ 53576166 (-)
LOC110490308 LOC106576153 coding upstream 330139 53578839 ~ 53584339 (-)
efcab6 efcab6 coding upstream 507779 53756479 ~ 53786697 (-)
sult4a1 LOC106576158 coding upstream 539978 53788678 ~ 53817042 (-)
G1306548 NA non-coding downstream 9001 53238847 ~ 53239190 (-)
G1306547 NA non-coding downstream 10792 53237136 ~ 53237399 (-)
G1306283 NA non-coding downstream 93126 53154615 ~ 53155065 (-)
G1306233 NA non-coding downstream 97996 53057423 ~ 53150195 (-)
G1306242 NA non-coding downstream 106116 53075193 ~ 53142075 (-)
G1306554 NA non-coding upstream 6798 53255498 ~ 53255722 (-)
G1306564 NA non-coding upstream 20987 53269687 ~ 53270136 (-)
G1306631 NA non-coding upstream 193754 53442454 ~ 53442995 (-)
G1307199 NA non-coding upstream 378933 53627633 ~ 53672203 (-)
G1306232 LOC106576137 other downstream 185911 53054849 ~ 53062280 (-)
LOC110490288 LOC106609184 other downstream 438578 52630838 ~ 52809711 (-)
G1304988 NA other downstream 1258018 51989711 ~ 51990173 (-)
G1304896 LOC107662719 other downstream 1325663 51921495 ~ 51922528 (-)
LOC110490744 LOC106576129 other downstream 1454837 51785488 ~ 51793354 (-)
G1307309 NA other upstream 650610 53899310 ~ 53922128 (-)
G1307473 NA other upstream 901344 54150044 ~ 54150540 (-)
G1307901 NA other upstream 1518272 54766972 ~ 54768422 (-)
LOC110490337 LOC106609287 other upstream 1900075 55148760 ~ 55155353 (-)

Expression


Co-expression Network