Item | Value |
---|---|
gene id | G1306344 |
gene name | NA |
gene type | non-coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048579.1 |
NCBI id | CM023233.2 |
chromosome length | 81569517 |
location | 53249661 ~ 53249944 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU1490329 | True | 284 | lncRNA | 0.47 | 1 | 53249661 | 53249944 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
bcat1 | LOC106576140 | coding | upstream | 107870 | 53114950 ~ 53141791 (+) |
cfap94 | casc1 | coding | upstream | 163501 | 53077695 ~ 53086160 (+) |
LOC110490748 | slc5a8 | coding | upstream | 196255 | 53045349 ~ 53053406 (+) |
LOC110490293 | LOC106609177 | coding | upstream | 213944 | 53029636 ~ 53035717 (+) |
LOC110490746 | LOC106609171 | coding | upstream | 228413 | 53008490 ~ 53021248 (+) |
sox5 | LOC106576150 | coding | downstream | 102804 | 53352462 ~ 53471763 (+) |
c15h12orf45 | LOC106609327 | coding | downstream | 302254 | 53552198 ~ 53554958 (+) |
scube1 | LOC106576154 | coding | downstream | 335115 | 53585059 ~ 53728823 (+) |
trnak-cuu-7 | NA | coding | downstream | 450352 | 53700296 ~ 53700368 (+) |
mpped1 | LOC106576156 | coding | downstream | 456524 | 53706468 ~ 53755855 (+) |
G1306342 | NA | non-coding | upstream | 1447 | 53247760 ~ 53248214 (+) |
G1306340 | NA | non-coding | upstream | 2913 | 53240215 ~ 53246748 (+) |
G1306339 | NA | non-coding | upstream | 9612 | 53239760 ~ 53240049 (+) |
G1306321 | NA | non-coding | upstream | 36726 | 53212698 ~ 53212935 (+) |
G1306297 | NA | non-coding | upstream | 37419 | 53172623 ~ 53212242 (+) |
G1306348 | NA | non-coding | downstream | 6828 | 53256772 ~ 53256971 (+) |
G1306357 | NA | non-coding | downstream | 13675 | 53263619 ~ 53264011 (+) |
G1306361 | NA | non-coding | downstream | 20015 | 53269959 ~ 53270172 (+) |
G1306364 | NA | non-coding | downstream | 24220 | 53274164 ~ 53274467 (+) |
G1306373 | NA | non-coding | downstream | 36791 | 53286735 ~ 53286973 (+) |
G1305302 | NA | other | upstream | 736611 | 52512629 ~ 52513050 (+) |
G1304886 | NA | other | upstream | 1334651 | 51914597 ~ 51915010 (+) |
G1304083 | NA | other | upstream | 1596661 | 51584754 ~ 51653000 (+) |
LOC110490271 | LOC106576088 | other | upstream | 1851699 | 51386269 ~ 51404401 (+) |
atxn7l1 | LOC106576087 | other | upstream | 1890174 | 51351361 ~ 51382579 (+) |
G1306708 | NA | other | downstream | 330597 | 53580541 ~ 53583352 (+) |
LOC110490314 | LOC106576157 | other | downstream | 639284 | 53875911 ~ 53890829 (+) |
LOC110490339 | LOC106576184 | other | downstream | 1908062 | 55157706 ~ 55170847 (+) |
G1308238 | NA | other | downstream | 2013014 | 55262958 ~ 55278451 (+) |