Gene
RNA
| Item | Value |
|---|---|
| gene id | G1306554 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 53255498 ~ 53255722 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1490554 | True | 225 | lncRNA | 0.35 | 1 | 53255498 | 53255722 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| lrmp | LOC106576138 | coding | downstream | 146288 | 53085647 ~ 53109210 (-) |
| LOC110490299 | LOC106576137 | coding | downstream | 192697 | 53060950 ~ 53062801 (-) |
| LOC110490297 | LOC106576136 | coding | downstream | 193183 | 53054846 ~ 53062315 (-) |
| LOC110490294 | utp20 | coding | downstream | 214841 | 53034589 ~ 53040657 (-) |
| etnk1 | LOC106609326 | coding | upstream | 272499 | 53528016 ~ 53548231 (-) |
| aldh1l2 | LOC106576152 | coding | upstream | 299316 | 53555038 ~ 53576166 (-) |
| LOC110490308 | LOC106576153 | coding | upstream | 323117 | 53578839 ~ 53584339 (-) |
| efcab6 | efcab6 | coding | upstream | 500757 | 53756479 ~ 53786697 (-) |
| sult4a1 | LOC106576158 | coding | upstream | 532956 | 53788678 ~ 53817042 (-) |
| G1306552 | NA | non-coding | downstream | 6798 | 53248191 ~ 53248700 (-) |
| G1306548 | NA | non-coding | downstream | 16308 | 53238847 ~ 53239190 (-) |
| G1306547 | NA | non-coding | downstream | 18099 | 53237136 ~ 53237399 (-) |
| G1306283 | NA | non-coding | downstream | 100433 | 53154615 ~ 53155065 (-) |
| G1306233 | NA | non-coding | downstream | 105303 | 53057423 ~ 53150195 (-) |
| G1306564 | NA | non-coding | upstream | 13965 | 53269687 ~ 53270136 (-) |
| G1306631 | NA | non-coding | upstream | 186732 | 53442454 ~ 53442995 (-) |
| G1307199 | NA | non-coding | upstream | 371911 | 53627633 ~ 53672203 (-) |
| G1307204 | NA | non-coding | upstream | 388182 | 53643904 ~ 53644780 (-) |
| G1306232 | LOC106576137 | other | downstream | 193218 | 53054849 ~ 53062280 (-) |
| LOC110490288 | LOC106609184 | other | downstream | 445885 | 52630838 ~ 52809711 (-) |
| G1304988 | NA | other | downstream | 1265325 | 51989711 ~ 51990173 (-) |
| G1304896 | LOC107662719 | other | downstream | 1332970 | 51921495 ~ 51922528 (-) |
| LOC110490744 | LOC106576129 | other | downstream | 1462144 | 51785488 ~ 51793354 (-) |
| G1307309 | NA | other | upstream | 643588 | 53899310 ~ 53922128 (-) |
| G1307473 | NA | other | upstream | 894322 | 54150044 ~ 54150540 (-) |
| G1307901 | NA | other | upstream | 1511250 | 54766972 ~ 54768422 (-) |
| LOC110490337 | LOC106609287 | other | upstream | 1893053 | 55148760 ~ 55155353 (-) |
