G1306564


Basic Information

Item Value
gene id G1306564
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 53269687 ~ 53270136 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1490564
gccatcattgatccatttttcattttccattggttttgtcttgtcttcccacacacctggtttcaatcccattcattacctgttgtgtatttaaccctctgtttcccctcatgtctttgtcagagattgttttatgtcaGTGTTGTTTTATggttgtataggtgcgcgacgggtcctcgtacccatgtttatttatgtatgtacatattagtgtttggagcatgttaagtgggcatttattaaaagactccatttccACTCCGTTTGaatctcctgcgcctgacttccctgccacctatacacacgactctgacagaAACTCTTACCATaaatatgaagtcagcaggagaagaCACTTCGCTCATGGAGGTGGAGGAACGCGTCATGGAACAAGCGGAGGAGATTGACAGTCTGAGCACCGCCATGGATCGCATTGTCCAGAATATGGAC

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1490564 True 450 lncRNA 0.44 1 53269687 53270136

Neighbor

gene id symbol gene type direction distance location
lrmp LOC106576138 coding downstream 160477 53085647 ~ 53109210 (-)
LOC110490299 LOC106576137 coding downstream 206886 53060950 ~ 53062801 (-)
LOC110490297 LOC106576136 coding downstream 207372 53054846 ~ 53062315 (-)
LOC110490294 utp20 coding downstream 229030 53034589 ~ 53040657 (-)
etnk1 LOC106609326 coding upstream 258085 53528016 ~ 53548231 (-)
aldh1l2 LOC106576152 coding upstream 284902 53555038 ~ 53576166 (-)
LOC110490308 LOC106576153 coding upstream 308703 53578839 ~ 53584339 (-)
efcab6 efcab6 coding upstream 486343 53756479 ~ 53786697 (-)
sult4a1 LOC106576158 coding upstream 518542 53788678 ~ 53817042 (-)
G1306554 NA non-coding downstream 13965 53255498 ~ 53255722 (-)
G1306552 NA non-coding downstream 20987 53248191 ~ 53248700 (-)
G1306548 NA non-coding downstream 30497 53238847 ~ 53239190 (-)
G1306547 NA non-coding downstream 32288 53237136 ~ 53237399 (-)
G1306283 NA non-coding downstream 114622 53154615 ~ 53155065 (-)
G1306631 NA non-coding upstream 172318 53442454 ~ 53442995 (-)
G1307199 NA non-coding upstream 357497 53627633 ~ 53672203 (-)
G1307204 NA non-coding upstream 373768 53643904 ~ 53644780 (-)
G1307250 NA non-coding upstream 475135 53745271 ~ 53842233 (-)
G1306232 LOC106576137 other downstream 207407 53054849 ~ 53062280 (-)
LOC110490288 LOC106609184 other downstream 460074 52630838 ~ 52809711 (-)
G1304988 NA other downstream 1279514 51989711 ~ 51990173 (-)
G1304896 LOC107662719 other downstream 1347159 51921495 ~ 51922528 (-)
LOC110490744 LOC106576129 other downstream 1476333 51785488 ~ 51793354 (-)
G1307309 NA other upstream 629174 53899310 ~ 53922128 (-)
G1307473 NA other upstream 879908 54150044 ~ 54150540 (-)
G1307901 NA other upstream 1496836 54766972 ~ 54768422 (-)
LOC110490337 LOC106609287 other upstream 1878639 55148760 ~ 55155353 (-)

Expression


Co-expression Network