Gene
RNA
| Item | Value |
|---|---|
| gene id | G1306390 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 53304663 ~ 53304873 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1490378 | True | 211 | lncRNA | 0.40 | 1 | 53304663 | 53304873 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| bcat1 | LOC106576140 | coding | upstream | 162872 | 53114950 ~ 53141791 (+) |
| cfap94 | casc1 | coding | upstream | 218503 | 53077695 ~ 53086160 (+) |
| LOC110490748 | slc5a8 | coding | upstream | 251257 | 53045349 ~ 53053406 (+) |
| LOC110490293 | LOC106609177 | coding | upstream | 268946 | 53029636 ~ 53035717 (+) |
| LOC110490746 | LOC106609171 | coding | upstream | 283415 | 53008490 ~ 53021248 (+) |
| sox5 | LOC106576150 | coding | downstream | 47875 | 53352462 ~ 53471763 (+) |
| c15h12orf45 | LOC106609327 | coding | downstream | 247325 | 53552198 ~ 53554958 (+) |
| scube1 | LOC106576154 | coding | downstream | 280186 | 53585059 ~ 53728823 (+) |
| trnak-cuu-7 | NA | coding | downstream | 395423 | 53700296 ~ 53700368 (+) |
| mpped1 | LOC106576156 | coding | downstream | 401595 | 53706468 ~ 53755855 (+) |
| G1306389 | NA | non-coding | upstream | 381 | 53303917 ~ 53304282 (+) |
| G1306386 | NA | non-coding | upstream | 6355 | 53298085 ~ 53298308 (+) |
| G1306385 | NA | non-coding | upstream | 7297 | 53296993 ~ 53297366 (+) |
| G1306373 | NA | non-coding | upstream | 17690 | 53286735 ~ 53286973 (+) |
| G1306364 | NA | non-coding | upstream | 30196 | 53274164 ~ 53274467 (+) |
| G1306411 | NA | non-coding | downstream | 26283 | 53331156 ~ 53331736 (+) |
| G1306708 | NA | non-coding | downstream | 277675 | 53580541 ~ 53583352 (+) |
| G1306723 | NA | non-coding | downstream | 284861 | 53589734 ~ 53629404 (+) |
| G1306755 | NA | non-coding | downstream | 370436 | 53675309 ~ 53710289 (+) |
| G1305302 | NA | other | upstream | 791613 | 52512629 ~ 52513050 (+) |
| G1304886 | NA | other | upstream | 1389653 | 51914597 ~ 51915010 (+) |
| G1304083 | NA | other | upstream | 1651663 | 51584754 ~ 51653000 (+) |
| LOC110490271 | LOC106576088 | other | upstream | 1906701 | 51386269 ~ 51404401 (+) |
| atxn7l1 | LOC106576087 | other | upstream | 1945176 | 51351361 ~ 51382579 (+) |
| LOC110490314 | LOC106576157 | other | downstream | 584355 | 53875911 ~ 53890829 (+) |
| LOC110490339 | LOC106576184 | other | downstream | 1853133 | 55157706 ~ 55170847 (+) |
| G1308238 | NA | other | downstream | 1958085 | 55262958 ~ 55278451 (+) |
