G1306723


Basic Information

Item Value
gene id G1306723
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 53589734 ~ 53629404 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1490749
gatatactgtagctctgtcttcatTTGTTTTGCCCTGGTCTActtgatatactgtagctctgtctccatTTGTTTTGCCCTGGTCTActtgatatactgtagctctgtctccatTTGTTTTGCCCCGGTCTActtgatatactgtagctctgtctccatTTGTTTTGCCCTGGTCTActtgatatactgtagctctgtcttcatTTGTTTTGCCCTGGTCTActtgatatactgtagctctgtctctctctctctctctctctctgtctctgtctctctctctctctctctctctgtctctctctctctgtctctctctctctctctctgtctctctctctctctctctctctctgtctctctctctctctctctctctctctctctctgtctctctctctctctctatctctctctctctctctgtctctctctgtctctctctctctctctctctctctctctctctctctgtctctctctgtctctctctctctgtctctctttctctgtctctctctctctgtctctctctctgtctc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1490749 True 542 lncRNA 0.46 3 53589734 53629404

Neighbor

gene id symbol gene type direction distance location
c15h12orf45 LOC106609327 coding upstream 34776 53552198 ~ 53554958 (+)
sox5 LOC106576150 coding upstream 117971 53352462 ~ 53471763 (+)
bcat1 LOC106576140 coding upstream 447943 53114950 ~ 53141791 (+)
cfap94 casc1 coding upstream 503574 53077695 ~ 53086160 (+)
LOC110490748 slc5a8 coding upstream 536328 53045349 ~ 53053406 (+)
trnak-cuu-7 NA coding downstream 70892 53700296 ~ 53700368 (+)
mpped1 LOC106576156 coding downstream 77064 53706468 ~ 53755855 (+)
LOC110490313 LOC106576157 coding downstream 198734 53828138 ~ 53859559 (+)
LOC110490314 LOC106576157 coding downstream 246507 53875911 ~ 53890829 (+)
ttll12 ttll12 coding downstream 280244 53909648 ~ 53959246 (+)
G1306708 NA non-coding upstream 6382 53580541 ~ 53583352 (+)
G1306411 NA non-coding upstream 257998 53331156 ~ 53331736 (+)
G1306390 NA non-coding upstream 284861 53304663 ~ 53304873 (+)
G1306389 NA non-coding upstream 285452 53303917 ~ 53304282 (+)
G1306755 NA non-coding downstream 45905 53675309 ~ 53710289 (+)
scube1 LOC106576154 non-coding downstream 69343 53585059 ~ 53728823 (+)
G1306852 NA non-coding downstream 300401 53929805 ~ 53930980 (+)
G1306844 NA non-coding downstream 446113 54075517 ~ 54077861 (+)
G1305302 NA other upstream 1076684 52512629 ~ 52513050 (+)
G1304886 NA other upstream 1674724 51914597 ~ 51915010 (+)
G1304083 NA other upstream 1936734 51584754 ~ 51653000 (+)
LOC110490339 LOC106576184 other downstream 1528602 55157706 ~ 55170847 (+)
G1308238 NA other downstream 1633554 55262958 ~ 55278451 (+)
G1308299 LOC106576208 other downstream 1718632 55348036 ~ 55349205 (+)
LOC110490357 LOC106609270 other downstream 1940614 55569924 ~ 55583925 (+)

Expression


Co-expression Network