Gene
RNA
| Item | Value |
|---|---|
| gene id | G1306755 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 53675309 ~ 53710289 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1490782 | True | 238 | lncRNA | 0.47 | 2 | 53675309 | 53710289 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| c15h12orf45 | LOC106609327 | coding | upstream | 120351 | 53552198 ~ 53554958 (+) |
| sox5 | LOC106576150 | coding | upstream | 203546 | 53352462 ~ 53471763 (+) |
| bcat1 | LOC106576140 | coding | upstream | 533518 | 53114950 ~ 53141791 (+) |
| cfap94 | casc1 | coding | upstream | 589149 | 53077695 ~ 53086160 (+) |
| LOC110490748 | slc5a8 | coding | upstream | 621903 | 53045349 ~ 53053406 (+) |
| LOC110490313 | LOC106576157 | coding | downstream | 117849 | 53828138 ~ 53859559 (+) |
| LOC110490314 | LOC106576157 | coding | downstream | 165622 | 53875911 ~ 53890829 (+) |
| ttll12 | ttll12 | coding | downstream | 199359 | 53909648 ~ 53959246 (+) |
| LOC110490318 | LOC106576161 | coding | downstream | 229876 | 53940165 ~ 53981489 (+) |
| LOC110490319 | LOC106576161 | coding | downstream | 278642 | 53988931 ~ 54066265 (+) |
| G1306723 | NA | non-coding | upstream | 45905 | 53589734 ~ 53629404 (+) |
| G1306708 | NA | non-coding | upstream | 91957 | 53580541 ~ 53583352 (+) |
| G1306411 | NA | non-coding | upstream | 343573 | 53331156 ~ 53331736 (+) |
| G1306390 | NA | non-coding | upstream | 370436 | 53304663 ~ 53304873 (+) |
| G1306852 | NA | non-coding | downstream | 219516 | 53929805 ~ 53930980 (+) |
| G1306844 | NA | non-coding | downstream | 365228 | 54075517 ~ 54077861 (+) |
| G1306899 | NA | non-coding | downstream | 382433 | 54092722 ~ 54140427 (+) |
| LOC118938924 | NA | non-coding | downstream | 385682 | 54095971 ~ 54096529 (+) |
| G1305302 | NA | other | upstream | 1162259 | 52512629 ~ 52513050 (+) |
| G1304886 | NA | other | upstream | 1760299 | 51914597 ~ 51915010 (+) |
| G1304083 | NA | other | upstream | 2022309 | 51584754 ~ 51653000 (+) |
| LOC110490339 | LOC106576184 | other | downstream | 1447717 | 55157706 ~ 55170847 (+) |
| G1308238 | NA | other | downstream | 1552669 | 55262958 ~ 55278451 (+) |
| G1308299 | LOC106576208 | other | downstream | 1637747 | 55348036 ~ 55349205 (+) |
| LOC110490357 | LOC106609270 | other | downstream | 1859729 | 55569924 ~ 55583925 (+) |
