G1307309


Basic Information

Item Value
gene id G1307309
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 53899310 ~ 53922128 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1491414
GTTGGGAAAGGTTTGTAAacgagcatttcactgtaaagccgagaccagttgtattcggcgcatgtgacaaataaaacgtgATTGATTGGTTTCCTACTGGAAAGAAACCCAGTATAGACCAGCATTTTGTGGTGAACGCCACAAACGTGGACAAACAAGTGTTGCAAGCAATCTCCACCTCCTGTAGCAGTTGATGGGAAGTGTCTCTAACCTGTTGGCGAAGCGCAGCCAGAACACGTTGTAGGAGTAGAGGCGTAGAGGCTGAACGGAGCGCAGCAGCAGCATGTAGCGGATATCAAACTTCACCAttcccacctcctccctctcaaacagCACCGGATCCTCCAGGTCTGCGAGAGGCCAGAGCACAGTGTAGGCCAGCTGGCCCTGTGTGTAGAAGAAGGGGGCCATGCAACAGCTAGGCTGATCAGAGTGCTGCACCTGGGAGCCAAACTCATCCATGATGTACCAGACGGGCACTTTTTCCTCTGCTgactggacacacacaggagaggggggggtgttagagagcaagagaaagaaatAGTGTGCGTGAAAAAGAGAGAGTATGTGCTCATACCCCCTGGGCCAGCTGGTAGGTCTGGTTGTACTTCCACATTTGTTTCAGCACCAGCTCCACAACGTCTGGGTCAGGGGCCTCTCCGTGGAAGTCCACCCCCATGAGGGAAGCCATCCTGGGCAGGAGGCCGGGGATCTGCTCCAGCTGCTGCCTAGAGCTCTCCACACGGAAAGCAGCCGAACCAATCCCAGGTGAGGATCCAGATGCTCTGACCATCTGCATGGAAGTCTGGGTGAAACTATGAGTCCATAAAAGAAAATGGAACCAGCCAAGATGGATGGGACCCTTCCAGGTAACCATGGCAACACCGATTGCAATCCAGGTAGCGGAGAGGTCCGGATGGCATCATCTCTCCCACTGCAAGAATCTCCCAGAGTGGAAGCCATGGATGAGTGACTGGAGGGAGAGCAGGGCCCTGAGAACATCTGAAGGAGGAAGAGGGTTTCGAGCCAAAGGACAGAAGCAGAGGGCCCAGACCAAACGGCCGGAAAGAAAGATGAAGAAGAAGGCTGTAGCCAACGagcaattggtagtagttactgtcttgtctcatcgctgcaactcccgtacggactcgggagaggcgaaggtcgagagccatgcatcctccaaaacacaacccaaccaagccgcactgcttcttgacacaacacacatccaacccggaagccagccgcaccaatgtgtcggaggaaacaccgtacacctagcaacctggtcagcatgcactgcacccagcctgccacaggagtcactagtgcgcgatgagacaaggatatccctgcctgccaaaccctccctaacccggacgacgctgggccaattgtgcaccgcccaatgggcctcccagtcgcagc

Function

NR:

description
PREDICTED: tubulin--tyrosine ligase-like protein 12 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1491414 True 1437 TUCP 0.55 3 53899310 53922128

Neighbor

gene id symbol gene type direction distance location
sult4a1 LOC106576158 coding downstream 82268 53788678 ~ 53817042 (-)
efcab6 efcab6 coding downstream 112613 53756479 ~ 53786697 (-)
LOC110490308 LOC106576153 coding downstream 314971 53578839 ~ 53584339 (-)
aldh1l2 LOC106576152 coding downstream 323144 53555038 ~ 53576166 (-)
etnk1 LOC106609326 coding downstream 351079 53528016 ~ 53548231 (-)
LOC110490327 LOC106609305 coding upstream 370029 54292157 ~ 54302557 (-)
LOC110490750 LOC106576170 coding upstream 382880 54305008 ~ 54371525 (-)
LOC110490329 LOC106609303 coding upstream 452497 54374625 ~ 54380846 (-)
LOC110490332 LOC106609300 coding upstream 489175 54411303 ~ 54419096 (-)
LOC110490331 LOC106576204 coding upstream 675498 54597626 ~ 54599878 (-)
G1307311 NA non-coding downstream 2268 53896684 ~ 53897042 (-)
G1307337 NA non-coding downstream 2881 53896223 ~ 53896429 (-)
G1307335 NA non-coding downstream 4602 53894424 ~ 53894708 (-)
G1307316 NA non-coding downstream 6330 53892303 ~ 53892980 (-)
G1307315 NA non-coding downstream 7409 53856290 ~ 53891901 (-)
G1307304 NA non-coding upstream 17473 53939601 ~ 53940017 (-)
G1307347 LOC106576160 non-coding upstream 40369 53962497 ~ 53969867 (-)
G1307386 NA non-coding upstream 102017 54024145 ~ 54026157 (-)
G1307431 LOC106576165 non-coding upstream 162646 54084774 ~ 54085218 (-)
G1307432 NA non-coding upstream 163133 54085261 ~ 54085550 (-)
G1306232 LOC106576137 other downstream 837030 53054849 ~ 53062280 (-)
LOC110490288 LOC106609184 other downstream 1089697 52630838 ~ 52809711 (-)
G1304988 NA other downstream 1909137 51989711 ~ 51990173 (-)
G1304896 LOC107662719 other downstream 1976782 51921495 ~ 51922528 (-)
G1307473 NA other upstream 227916 54150044 ~ 54150540 (-)
G1307901 NA other upstream 844844 54766972 ~ 54768422 (-)
LOC110490337 LOC106609287 other upstream 1226647 55148760 ~ 55155353 (-)
LOC110490757 LOC106576193 other upstream 1496195 55417169 ~ 55438953 (-)
G1308831 NA other upstream 1634104 55556232 ~ 55556574 (-)

Expression


Co-expression Network