Gene
RNA
| Item | Value |
|---|---|
| gene id | G1307432 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 54085261 ~ 54085550 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| caprin-2-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1491558 | True | 290 | lncRNA | 0.49 | 1 | 54085261 | 54085550 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| sult4a1 | LOC106576158 | coding | downstream | 268219 | 53788678 ~ 53817042 (-) |
| efcab6 | efcab6 | coding | downstream | 298564 | 53756479 ~ 53786697 (-) |
| LOC110490308 | LOC106576153 | coding | downstream | 500922 | 53578839 ~ 53584339 (-) |
| aldh1l2 | LOC106576152 | coding | downstream | 509095 | 53555038 ~ 53576166 (-) |
| etnk1 | LOC106609326 | coding | downstream | 537030 | 53528016 ~ 53548231 (-) |
| LOC110490327 | LOC106609305 | coding | upstream | 206607 | 54292157 ~ 54302557 (-) |
| LOC110490750 | LOC106576170 | coding | upstream | 219458 | 54305008 ~ 54371525 (-) |
| LOC110490329 | LOC106609303 | coding | upstream | 289075 | 54374625 ~ 54380846 (-) |
| LOC110490332 | LOC106609300 | coding | upstream | 325753 | 54411303 ~ 54419096 (-) |
| LOC110490331 | LOC106576204 | coding | upstream | 512076 | 54597626 ~ 54599878 (-) |
| G1307431 | LOC106576165 | non-coding | downstream | 43 | 54084774 ~ 54085218 (-) |
| G1307386 | NA | non-coding | downstream | 59104 | 54024145 ~ 54026157 (-) |
| G1307306 | NA | non-coding | downstream | 99093 | 53919151 ~ 53986168 (-) |
| G1307347 | LOC106576160 | non-coding | downstream | 115394 | 53962497 ~ 53969867 (-) |
| G1307304 | NA | non-coding | downstream | 145244 | 53939601 ~ 53940017 (-) |
| G1307433 | NA | non-coding | upstream | 1246 | 54086796 ~ 54087176 (-) |
| G1307434 | NA | non-coding | upstream | 2253 | 54087803 ~ 54088302 (-) |
| G1307435 | LOC106576165 | non-coding | upstream | 3028 | 54088578 ~ 54089929 (-) |
| G1307453 | NA | non-coding | upstream | 32708 | 54118258 ~ 54120317 (-) |
| G1307454 | NA | non-coding | upstream | 34913 | 54120463 ~ 54121361 (-) |
| G1307309 | NA | other | downstream | 163133 | 53899310 ~ 53922128 (-) |
| G1306232 | LOC106576137 | other | downstream | 1022981 | 53054849 ~ 53062280 (-) |
| LOC110490288 | LOC106609184 | other | downstream | 1275648 | 52630838 ~ 52809711 (-) |
| G1304988 | NA | other | downstream | 2095088 | 51989711 ~ 51990173 (-) |
| G1307473 | NA | other | upstream | 64494 | 54150044 ~ 54150540 (-) |
| G1307901 | NA | other | upstream | 681422 | 54766972 ~ 54768422 (-) |
| LOC110490337 | LOC106609287 | other | upstream | 1063225 | 55148760 ~ 55155353 (-) |
| LOC110490757 | LOC106576193 | other | upstream | 1332773 | 55417169 ~ 55438953 (-) |
| G1308831 | NA | other | upstream | 1470682 | 55556232 ~ 55556574 (-) |
