G1307493


Basic Information

Item Value
gene id G1307493
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 54189428 ~ 54189897 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1491619
tatgggtccaggttttgcagctctttcagaacatctgctgttacctagcctcagtgcagtgggcagctgggacgaggtgctcttgttctccatgcaCTTTACAGTGTCCAAAAACTTTTGGGAGTTAGAGCTAAAGGAAGAGAACTTCTGCTTGAAAAagttagcctttgctttcctggctgactgcgtgtattggttcctgacttccctgaacagttgcatacggtggggactatttgatgctattgcagtccgccacaggatgtttttgtgctgatcaAGGGCAGtctggtctggagtgaaccaagggctaaatCAGCAGAGACTGATAAAAGAAATACATGTCTGTGATAGGGCTAGGAATAACCTGGTGAGcaggtgaggagagaaggaggctGGGTTGTCCTGCTCAGAGAAGAGAGGCATGGAGCCACCCATCAGCCACAGCCTGAAGGACATGATGACCGCCA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1491619 True 470 lncRNA 0.50 1 54189428 54189897

Neighbor

gene id symbol gene type direction distance location
sult4a1 LOC106576158 coding downstream 372386 53788678 ~ 53817042 (-)
efcab6 efcab6 coding downstream 402731 53756479 ~ 53786697 (-)
LOC110490308 LOC106576153 coding downstream 605089 53578839 ~ 53584339 (-)
aldh1l2 LOC106576152 coding downstream 613262 53555038 ~ 53576166 (-)
etnk1 LOC106609326 coding downstream 641197 53528016 ~ 53548231 (-)
LOC110490327 LOC106609305 coding upstream 102260 54292157 ~ 54302557 (-)
LOC110490750 LOC106576170 coding upstream 115111 54305008 ~ 54371525 (-)
LOC110490329 LOC106609303 coding upstream 184728 54374625 ~ 54380846 (-)
LOC110490332 LOC106609300 coding upstream 221406 54411303 ~ 54419096 (-)
LOC110490331 LOC106576204 coding upstream 407729 54597626 ~ 54599878 (-)
G1307474 NA non-coding downstream 36786 54152406 ~ 54152642 (-)
G1307472 NA non-coding downstream 39758 54149373 ~ 54149670 (-)
G1307469 LOC106576167 non-coding downstream 43503 54145564 ~ 54145925 (-)
G1307454 NA non-coding downstream 68067 54120463 ~ 54121361 (-)
G1307453 NA non-coding downstream 69111 54118258 ~ 54120317 (-)
G1307494 NA non-coding upstream 79 54189976 ~ 54237714 (-)
G1307531 LOC106576203 non-coding upstream 71185 54261082 ~ 54261594 (-)
G1307599 NA non-coding upstream 209386 54399283 ~ 54400080 (-)
G1307593 NA non-coding upstream 215461 54405358 ~ 54406680 (-)
G1307473 NA other downstream 38888 54150044 ~ 54150540 (-)
G1307309 NA other downstream 267300 53899310 ~ 53922128 (-)
G1306232 LOC106576137 other downstream 1127148 53054849 ~ 53062280 (-)
LOC110490288 LOC106609184 other downstream 1379815 52630838 ~ 52809711 (-)
G1307901 NA other upstream 577075 54766972 ~ 54768422 (-)
LOC110490337 LOC106609287 other upstream 958878 55148760 ~ 55155353 (-)
LOC110490757 LOC106576193 other upstream 1228426 55417169 ~ 55438953 (-)
G1308831 NA other upstream 1366335 55556232 ~ 55556574 (-)
G1308906 NA other upstream 1556388 55746285 ~ 55747753 (-)

Expression


Co-expression Network