Gene
RNA
| Item | Value |
|---|---|
| gene id | G1307531 |
| gene name | LOC106576203 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 54261082 ~ 54261594 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| transmembrane protease serine 9-like isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1491657 | True | 332 | lncRNA | 0.52 | 2 | 54261082 | 54261594 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| sult4a1 | LOC106576158 | coding | downstream | 444040 | 53788678 ~ 53817042 (-) |
| efcab6 | efcab6 | coding | downstream | 474385 | 53756479 ~ 53786697 (-) |
| LOC110490308 | LOC106576153 | coding | downstream | 676743 | 53578839 ~ 53584339 (-) |
| aldh1l2 | LOC106576152 | coding | downstream | 684916 | 53555038 ~ 53576166 (-) |
| etnk1 | LOC106609326 | coding | downstream | 712851 | 53528016 ~ 53548231 (-) |
| LOC110490327 | LOC106609305 | coding | upstream | 30563 | 54292157 ~ 54302557 (-) |
| LOC110490750 | LOC106576170 | coding | upstream | 43414 | 54305008 ~ 54371525 (-) |
| LOC110490329 | LOC106609303 | coding | upstream | 113031 | 54374625 ~ 54380846 (-) |
| LOC110490332 | LOC106609300 | coding | upstream | 149709 | 54411303 ~ 54419096 (-) |
| LOC110490331 | LOC106576204 | coding | upstream | 336032 | 54597626 ~ 54599878 (-) |
| G1307494 | NA | non-coding | downstream | 23368 | 54189976 ~ 54237714 (-) |
| G1307493 | NA | non-coding | downstream | 71185 | 54189428 ~ 54189897 (-) |
| G1307474 | NA | non-coding | downstream | 108440 | 54152406 ~ 54152642 (-) |
| G1307472 | NA | non-coding | downstream | 111412 | 54149373 ~ 54149670 (-) |
| G1307469 | LOC106576167 | non-coding | downstream | 115157 | 54145564 ~ 54145925 (-) |
| G1307599 | NA | non-coding | upstream | 137689 | 54399283 ~ 54400080 (-) |
| G1307593 | NA | non-coding | upstream | 143764 | 54405358 ~ 54406680 (-) |
| G1307626 | NA | non-coding | upstream | 245457 | 54507051 ~ 54515880 (-) |
| G1307473 | NA | other | downstream | 110542 | 54150044 ~ 54150540 (-) |
| G1307309 | NA | other | downstream | 338954 | 53899310 ~ 53922128 (-) |
| G1306232 | LOC106576137 | other | downstream | 1198802 | 53054849 ~ 53062280 (-) |
| LOC110490288 | LOC106609184 | other | downstream | 1451469 | 52630838 ~ 52809711 (-) |
| G1307901 | NA | other | upstream | 505378 | 54766972 ~ 54768422 (-) |
| LOC110490337 | LOC106609287 | other | upstream | 887181 | 55148760 ~ 55155353 (-) |
| LOC110490757 | LOC106576193 | other | upstream | 1156729 | 55417169 ~ 55438953 (-) |
| G1308831 | NA | other | upstream | 1294638 | 55556232 ~ 55556574 (-) |
| G1308906 | NA | other | upstream | 1484691 | 55746285 ~ 55747753 (-) |
