G1307599


Basic Information

Item Value
gene id G1307599
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 54399283 ~ 54400080 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1491730
ttttaggctgggtttctgtacagcacgttgagatatcagctgatgtacgaagggctatataaatacatttgatttgttttgtgtttgcGATGAaagaacattttatttttcatccctAAGAGTGTCATGCTGACAGTGATCTGTATCAGAGAACAAACACTTGGTTGTGTTATTATTCATTGGCAAACACACAGTATATTTCACAACCCCTCTGAAATGATTAAATGCACAGATTATTGTTTGAGCTGAAATGCATTATTCTCACAGAGCCAGAGATAAATAGCCAACATCATGTTCCGTTTATAGTAGACAACGATAATACACTCTGACTGCTGCACAAACACTCATTAATATGGCTGAGTGGTTCTTGTGGATTCcaactggtctgtcaaattaaGACATATGATATTTCCAAATATCCAGATAAACTCCATTTCCTTGGTTCGGTGTGTTTTGAGTGAGATGAAGAGTTGACATGTCCTTACAGCAGTCTTTGCTGAACAGGTTTCATCCAGTCAGTGCTAGTGGTGATATTCCCAAACATTCCCAACGAGGAGGAGGGAAGTTGGGAAAACTACAACGattccctcccctcctcactaTCGGATAGTGGTGACACTAAAGGAGCAAGCCTCGGCTTATAGTTATTTCGTTTCTGTGACCATTTCCAATCCCAGCTGTGACAAAATAGTCCTGCAAAGTCCACGAGTCCAGTATGTCATTGTCATGTTGTCCaatgggaaagagagggggggtatGGGGGGTATTCACTCTCCTGCAACTGTGCCCAATCTCTCT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1491730 True 798 lncRNA 0.41 1 54399283 54400080

Neighbor

gene id symbol gene type direction distance location
LOC110490329 LOC106609303 coding downstream 18437 54374625 ~ 54380846 (-)
LOC110490750 LOC106576170 coding downstream 27758 54305008 ~ 54371525 (-)
LOC110490327 LOC106609305 coding downstream 96726 54292157 ~ 54302557 (-)
sult4a1 LOC106576158 coding downstream 582241 53788678 ~ 53817042 (-)
efcab6 efcab6 coding downstream 612586 53756479 ~ 53786697 (-)
LOC110490332 LOC106609300 coding upstream 11223 54411303 ~ 54419096 (-)
LOC110490331 LOC106576204 coding upstream 197546 54597626 ~ 54599878 (-)
LOC110490751 LOC106609299 coding upstream 479560 54879640 ~ 54964148 (-)
LOC110490333 LOC106576174 coding upstream 569363 54969443 ~ 55017031 (-)
LOC110490752 LOC106609295 coding upstream 639921 55040001 ~ 55053870 (-)
G1307531 LOC106576203 non-coding downstream 137689 54261082 ~ 54261594 (-)
G1307494 NA non-coding downstream 161569 54189976 ~ 54237714 (-)
G1307493 NA non-coding downstream 209386 54189428 ~ 54189897 (-)
G1307474 NA non-coding downstream 246641 54152406 ~ 54152642 (-)
G1307593 NA non-coding upstream 5278 54405358 ~ 54406680 (-)
G1307626 NA non-coding upstream 106971 54507051 ~ 54515880 (-)
G1307625 NA non-coding upstream 113728 54513808 ~ 54518006 (-)
G1307727 NA non-coding upstream 215193 54615273 ~ 54615484 (-)
G1307473 NA other downstream 248743 54150044 ~ 54150540 (-)
G1307309 NA other downstream 477155 53899310 ~ 53922128 (-)
G1306232 LOC106576137 other downstream 1337003 53054849 ~ 53062280 (-)
LOC110490288 LOC106609184 other downstream 1589670 52630838 ~ 52809711 (-)
G1307901 NA other upstream 366892 54766972 ~ 54768422 (-)
LOC110490337 LOC106609287 other upstream 748695 55148760 ~ 55155353 (-)
LOC110490757 LOC106576193 other upstream 1018243 55417169 ~ 55438953 (-)
G1308831 NA other upstream 1156152 55556232 ~ 55556574 (-)
G1308906 NA other upstream 1346205 55746285 ~ 55747753 (-)

Expression


Co-expression Network