G1307593


Basic Information

Item Value
gene id G1307593
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 54405358 ~ 54406680 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1491724
TCTGCTCTGTCTGTATATTGCAAAtcagtgttaaggttagggttaggagttaggggaaATAGGATTTTGAGTGGGAATCAATGGTTTGGTCCGCACAAGCATAGTAAAATAAATAGGGACGGCtactgtgtgtgtgggcagggctctgtgcgtgtgtgtgtgcgtgtgtgtgcgcatgacCCCATTGCTCTCccctgtatgtgtatgtgtgacattagCATGAGCAATAAGGGTTGAGTcctcggtgtgtgtgtgctgtatatATTGGTGATCTAGCATATCACACTCGCCCTTTCTCTCAGAGCTGACTTATGTACCTACTTGTATGAAAGAGATGATTGTTCCTCTCCTGTCCGTCCTGTCCTCTCTAACCGAATGGCCATTGTGAATACTGAATACCTTTGCTGCCATTTTGAaactatcctcctctctctccaccagagtTGACTACTTCATTTGTTGTGGTTTATCGTTCAAAGCAGCACCCACATGATGCCTGACCTTGAAATGGGTTTATTGTTACTTTTATTGGGGGTTTATTGAGGTTTTTATAGATACATTGATGAATTTATCCAAACTCCAAtgttgtgttttgtcttgttttatgCAGCGTGGACATGCTAAAGCAGATTGACTGAGGGGAGAAGAAGAGGTCTTATATGAACACACTGATATTTGAGTCCATTCCATTTTGATACAAAGATGATTTTCTTCTGAATATGGGGATAAAACTGTGAttagacttttattttgaaggtctCTGTTCATTTGAAGTGCATGTTGGTTTGCTACAGACAGTATGACGTTTGTTTTGTTCCTGATTTGTACCACACAAGCCTCCATACTTTACCAACAAATGGGGGTTTGTTATGGGAAATTAAATTCAAAGTGTAAAGAAAACTCCTGTACCAGTCTACCAAACATGACTGACTGAAAGTGTTTATTGAGCTGTTGGGGTTTGACGCTCTCTGATAATTCTGTCTTGTCGTGACTGATAGCTCAGCTATCACCGTAGCTAGAACACTCTCAGCGCTTGGCGGGGATGGAGTCCTGTAACCATTCCAAATCAGTACAACGAAATCAGTGCAAATGCATTGAATGACACTTTAATATCCAGCGAGCTGATTTCTATTTCTCAGCTGTGAGATCTCGGGAGGTTTAATCGAGAACTTGTCGTTTTCCTAATGACGTTGGATATTTTTCTTTATGCTTTTACGTTTTCCAAGATGGCTGACGTCGGTGAACTGAACGTGGCTCTTGAGACTGCTGAAGCGAATGCCACACCCCCTGCTCCAACCCCCGCCCCTTTCCCACCGTCCCGCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1491724 True 1323 lncRNA 0.43 1 54405358 54406680

Neighbor

gene id symbol gene type direction distance location
LOC110490329 LOC106609303 coding downstream 24512 54374625 ~ 54380846 (-)
LOC110490750 LOC106576170 coding downstream 33833 54305008 ~ 54371525 (-)
LOC110490327 LOC106609305 coding downstream 102801 54292157 ~ 54302557 (-)
sult4a1 LOC106576158 coding downstream 588316 53788678 ~ 53817042 (-)
efcab6 efcab6 coding downstream 618661 53756479 ~ 53786697 (-)
LOC110490332 LOC106609300 coding upstream 4623 54411303 ~ 54419096 (-)
LOC110490331 LOC106576204 coding upstream 190946 54597626 ~ 54599878 (-)
LOC110490751 LOC106609299 coding upstream 472960 54879640 ~ 54964148 (-)
LOC110490333 LOC106576174 coding upstream 562763 54969443 ~ 55017031 (-)
LOC110490752 LOC106609295 coding upstream 633321 55040001 ~ 55053870 (-)
G1307599 NA non-coding downstream 5278 54399283 ~ 54400080 (-)
G1307531 LOC106576203 non-coding downstream 143764 54261082 ~ 54261594 (-)
G1307494 NA non-coding downstream 167644 54189976 ~ 54237714 (-)
G1307493 NA non-coding downstream 215461 54189428 ~ 54189897 (-)
G1307626 NA non-coding upstream 100371 54507051 ~ 54515880 (-)
G1307625 NA non-coding upstream 107128 54513808 ~ 54518006 (-)
G1307727 NA non-coding upstream 208593 54615273 ~ 54615484 (-)
G1307801 NA non-coding upstream 279219 54685899 ~ 54687794 (-)
G1307473 NA other downstream 254818 54150044 ~ 54150540 (-)
G1307309 NA other downstream 483230 53899310 ~ 53922128 (-)
G1306232 LOC106576137 other downstream 1343078 53054849 ~ 53062280 (-)
LOC110490288 LOC106609184 other downstream 1595745 52630838 ~ 52809711 (-)
G1307901 NA other upstream 360292 54766972 ~ 54768422 (-)
LOC110490337 LOC106609287 other upstream 742095 55148760 ~ 55155353 (-)
LOC110490757 LOC106576193 other upstream 1011643 55417169 ~ 55438953 (-)
G1308831 NA other upstream 1149552 55556232 ~ 55556574 (-)
G1308906 NA other upstream 1339605 55746285 ~ 55747753 (-)

Expression


Co-expression Network