G1307626


Basic Information

Item Value
gene id G1307626
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 54507051 ~ 54515880 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1491758
GTTATTTTCCTCTTTAACATCACTGACTTGTTTTTCCCCTctgtaacctcactgacttgttctttccctctttaacctcactgacttgttctttccctctttaacgtcactgacttgttctaCTGACTTGttatttccctctttaacctcactgacttgttctttccctctttaacgtcactgacttgttctttccctcttaacgtcactgacttgttctttccctctttaacctcactgacttgttctttccctctttaacctcactgacttgttctttccctctttaacctcactgacttgttcttttcctctttaacctcactgacttgttctttccctctttaacatcactgacttgttattttcctctttaacctccctgacttgttctttccctctttaacctcactgacttgttctttccctctttaacctcactgacttgttctttccctctttaacctcactgacttgttctattGACTTGTTCTTCCCTCTTTAAcatcactgacttgttctttccctctttaacctcactgacttgttctttccctctttaacctcactgacttgttctttccctctttaacctcactgacttgttctttccctctttaacctcactgacttgttctttccctctttaacctcactgacttattattttcctctttaacctcactgacttgttctactaacttgttctttccctctttaacgtcactgacttgttctttccctctttaacctcactgacttgttctttccctctttaacgtcactgacttgttctaCTGACTTGttatttccctctttaacctcactgacttgttctttccctctttaacctcactgacttgttctttccctctttaacctcactgacttgttctttccctctttaacgtcactgacttgttctttccctctttaacctcactgacttgttctttccctctttaacctcactgacttgttctttccctctttaacgtcactgacttattttcctctttaacctcactgacttgttctttccttctttaacctcactgacttgttctttccctctttaaactcactgacttgttcttttcctctttaacctcactgacttgtgctactgacttgttctttccctctttaacctcactgacttgttattttcctctttaacctcactgacttgttctattGACTTGTTCTTCCCTCTTTAatgtcactgacttgttctttccctctttaacctcactgacttgttatttccctctttaacctcactgacttgttctttccctctttaacctcactgacttgttctttccctctttaacctcactgacttgttctttccctctttaacctcactgacttgttctttccctctttaacctcactgacttgttctttccctctttaacctcactgacttgttattttcctctttaacctcactgacttgttctactgacttgttctttccctctttaacctcactgacttgttattttcctctttaacatcactgacttgttctttccctctttaacctcactgacttgttctttccctctttaacctcactgacttgttctttccctctttaacctcactgacttgttctttccctctttaacctcactgacttgttctttccctctttaacctcactgacttgttattttcctctttaacctcactgacttgttctactGACTTGTTCTTCCCTCTTTaacgtcactgacttgttctttccctctttaacctcactgacttgttctttccctctttaacgtcactgacttattgtactgacttgttctttcccctgtttaacgtcactgacttgttctttccctctttaacctcactgacttgttctttccctctttaacctcactgacttgttctttccctctttaacctcactgacttgttctttccttctttaacctcactgacttgttctattGACTTGttcttccctctttaacctcactgacttgttctttccctctttaacctcactgacttgttctttccctctttaacctcactgacttgtt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1491758 True 2069 lncRNA 0.40 2 54507051 54515880

Neighbor

gene id symbol gene type direction distance location
LOC110490332 LOC106609300 coding downstream 87955 54411303 ~ 54419096 (-)
LOC110490329 LOC106609303 coding downstream 126205 54374625 ~ 54380846 (-)
LOC110490750 LOC106576170 coding downstream 135526 54305008 ~ 54371525 (-)
LOC110490327 LOC106609305 coding downstream 204494 54292157 ~ 54302557 (-)
sult4a1 LOC106576158 coding downstream 690009 53788678 ~ 53817042 (-)
LOC110490331 LOC106576204 coding upstream 81746 54597626 ~ 54599878 (-)
LOC110490751 LOC106609299 coding upstream 363760 54879640 ~ 54964148 (-)
LOC110490333 LOC106576174 coding upstream 453563 54969443 ~ 55017031 (-)
LOC110490752 LOC106609295 coding upstream 524121 55040001 ~ 55053870 (-)
LOC110490754 NA coding upstream 622039 55136560 ~ 55147893 (-)
G1307593 NA non-coding downstream 100371 54405358 ~ 54406680 (-)
G1307599 NA non-coding downstream 106971 54399283 ~ 54400080 (-)
G1307531 LOC106576203 non-coding downstream 245457 54261082 ~ 54261594 (-)
G1307727 NA non-coding upstream 99393 54615273 ~ 54615484 (-)
G1307801 NA non-coding upstream 170019 54685899 ~ 54687794 (-)
G1307824 NA non-coding upstream 196680 54712560 ~ 54712789 (-)
G1307832 NA non-coding upstream 200339 54716219 ~ 54716571 (-)
G1307833 NA non-coding upstream 201147 54717027 ~ 54717247 (-)
G1307473 NA other downstream 356511 54150044 ~ 54150540 (-)
G1307309 NA other downstream 584923 53899310 ~ 53922128 (-)
efcab6 efcab6 other downstream 749703 53756479 ~ 53786697 (-)
G1306232 LOC106576137 other downstream 1444771 53054849 ~ 53062280 (-)
LOC110490288 LOC106609184 other downstream 1697438 52630838 ~ 52809711 (-)
G1307901 NA other upstream 251092 54766972 ~ 54768422 (-)
LOC110490337 LOC106609287 other upstream 632895 55148760 ~ 55155353 (-)
LOC110490757 LOC106576193 other upstream 902443 55417169 ~ 55438953 (-)
G1308831 NA other upstream 1040352 55556232 ~ 55556574 (-)
G1308906 NA other upstream 1230405 55746285 ~ 55747753 (-)

Expression


Co-expression Network