G1307625


Basic Information

Item Value
gene id G1307625
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 54513808 ~ 54518006 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1491757
tgacttgttattttcctctttaacctcactgacttgttctttccctctttaacctcactgacttgttctttccctctttaacctcactgacttgttctattGACTTGTTCTTCCCTCTTTAAcatcactgacttgttctttccctctttaacctcactgacttgttctttccctctttaacctcactgacttgttctttccctctttaacctcactgacttgttctttccctctttaacctcactgacttgttctttccctcttaaaCTCACTGACTTATTAttttcctctttaacctcactgacttgttctactAACTTGTTCTTCCCTCTTTaacgtcactgacttgttctttccctctttaacctcactgacttgttctttccctctttaacctcactgacttgttctttccctctttaacgtcactgacttattattttcctctttaacctcactgacttgttctttccctctttaacctcactgacttgttctttccctctttaaactcactgacttgttcttttcctctttaacctcactgacttgtgctactgacttgttctttccctctttaacctcactgacttgttcttttcctctttaacctcactgacttgttctattGACTTGTTCTTCCCTCTTTaacgtcactgacttgttctttccctctttaacctcactgacttgttctttccctctttaacctcactgacttgttctttccctctttaacctcactgacttgttctttccctctttaacctcactgacttgttctttccctctttaacctcactgacttgttctttccctctttaacctcactgacttgttattttcctctttaacctcactgacttgttctactGACTTGttatttccctctttaacctcactgatttgttctttccctctttaacctcactgacttgttcttttcctctttaacctcactgacttgttcttttccTTTtaaacctcactgacttgttctttccttctttaacctcactgacttgttctttccctctttaacctcactgacttgttcttttcctctttaacctcactgacttgttctattGACTTGTTCTTCCCTCTTTaacgtcactgacttgttctttccctctttaacctcactgacttgttctttccctctttaacctcactgacttatTATTTTcgtctttaacctcactgacttgttctactAACTTGTTCTTtccctctttaacgtcactgacttgttctttccctctttaacctcactgacttgttctttccctctttaacgtcactgacttattgtactgacttgttctttccctctttaacgtcactgacttgttctttccctctttaacctcactgacttgttctttccctctttaacctcactgacttgttctttccctctttaacgtcactgacttgttattttcctctttaacctcactgacttgttctttccctctttaacctcactgacttgttctttccctctttaaactcactgacttgttcttttcctctttaacctcactgacttgtgctactgacttgttctttccctctttaacctcactgacttgttc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1491757 True 1601 lncRNA 0.39 2 54513808 54518006

Neighbor

gene id symbol gene type direction distance location
LOC110490332 LOC106609300 coding downstream 94712 54411303 ~ 54419096 (-)
LOC110490329 LOC106609303 coding downstream 132962 54374625 ~ 54380846 (-)
LOC110490750 LOC106576170 coding downstream 142283 54305008 ~ 54371525 (-)
LOC110490327 LOC106609305 coding downstream 211251 54292157 ~ 54302557 (-)
sult4a1 LOC106576158 coding downstream 696766 53788678 ~ 53817042 (-)
LOC110490331 LOC106576204 coding upstream 79620 54597626 ~ 54599878 (-)
LOC110490751 LOC106609299 coding upstream 361634 54879640 ~ 54964148 (-)
LOC110490333 LOC106576174 coding upstream 451437 54969443 ~ 55017031 (-)
LOC110490752 LOC106609295 coding upstream 521995 55040001 ~ 55053870 (-)
LOC110490754 NA coding upstream 619913 55136560 ~ 55147893 (-)
G1307593 NA non-coding downstream 107128 54405358 ~ 54406680 (-)
G1307599 NA non-coding downstream 113728 54399283 ~ 54400080 (-)
G1307531 LOC106576203 non-coding downstream 252214 54261082 ~ 54261594 (-)
G1307727 NA non-coding upstream 97267 54615273 ~ 54615484 (-)
G1307801 NA non-coding upstream 167893 54685899 ~ 54687794 (-)
G1307824 NA non-coding upstream 194554 54712560 ~ 54712789 (-)
G1307832 NA non-coding upstream 198213 54716219 ~ 54716571 (-)
G1307833 NA non-coding upstream 199021 54717027 ~ 54717247 (-)
G1307473 NA other downstream 363268 54150044 ~ 54150540 (-)
G1307309 NA other downstream 591680 53899310 ~ 53922128 (-)
efcab6 efcab6 other downstream 756460 53756479 ~ 53786697 (-)
G1306232 LOC106576137 other downstream 1451528 53054849 ~ 53062280 (-)
LOC110490288 LOC106609184 other downstream 1704195 52630838 ~ 52809711 (-)
G1307901 NA other upstream 248966 54766972 ~ 54768422 (-)
LOC110490337 LOC106609287 other upstream 630769 55148760 ~ 55155353 (-)
LOC110490757 LOC106576193 other upstream 900317 55417169 ~ 55438953 (-)
G1308831 NA other upstream 1038226 55556232 ~ 55556574 (-)
G1308906 NA other upstream 1228279 55746285 ~ 55747753 (-)

Expression


Co-expression Network