Gene
RNA
| Item | Value |
|---|---|
| gene id | G1307824 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 54712560 ~ 54712789 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1491972 | True | 230 | lncRNA | 0.40 | 1 | 54712560 | 54712789 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110490331 | LOC106576204 | coding | downstream | 112682 | 54597626 ~ 54599878 (-) |
| LOC110490332 | LOC106609300 | coding | downstream | 293464 | 54411303 ~ 54419096 (-) |
| LOC110490329 | LOC106609303 | coding | downstream | 331714 | 54374625 ~ 54380846 (-) |
| LOC110490750 | LOC106576170 | coding | downstream | 341035 | 54305008 ~ 54371525 (-) |
| LOC110490327 | LOC106609305 | coding | downstream | 410003 | 54292157 ~ 54302557 (-) |
| LOC110490751 | LOC106609299 | coding | upstream | 166851 | 54879640 ~ 54964148 (-) |
| LOC110490333 | LOC106576174 | coding | upstream | 256654 | 54969443 ~ 55017031 (-) |
| LOC110490752 | LOC106609295 | coding | upstream | 327212 | 55040001 ~ 55053870 (-) |
| LOC110490754 | NA | coding | upstream | 425130 | 55136560 ~ 55147893 (-) |
| LOC110490337 | LOC106609287 | coding | upstream | 435971 | 55148760 ~ 55155353 (-) |
| G1307801 | NA | non-coding | downstream | 24766 | 54685899 ~ 54687794 (-) |
| G1307727 | NA | non-coding | downstream | 97076 | 54615273 ~ 54615484 (-) |
| G1307625 | NA | non-coding | downstream | 194554 | 54513808 ~ 54518006 (-) |
| G1307626 | NA | non-coding | downstream | 196680 | 54507051 ~ 54515880 (-) |
| G1307832 | NA | non-coding | upstream | 3430 | 54716219 ~ 54716571 (-) |
| G1307833 | NA | non-coding | upstream | 4238 | 54717027 ~ 54717247 (-) |
| G1307848 | NA | non-coding | upstream | 14569 | 54727358 ~ 54727580 (-) |
| G1307905 | NA | non-coding | upstream | 60805 | 54773594 ~ 54773801 (-) |
| G1307917 | NA | non-coding | upstream | 82313 | 54795102 ~ 54795352 (-) |
| G1307473 | NA | other | downstream | 562020 | 54150044 ~ 54150540 (-) |
| G1307309 | NA | other | downstream | 790432 | 53899310 ~ 53922128 (-) |
| efcab6 | efcab6 | other | downstream | 955212 | 53756479 ~ 53786697 (-) |
| G1306232 | LOC106576137 | other | downstream | 1650280 | 53054849 ~ 53062280 (-) |
| LOC110490288 | LOC106609184 | other | downstream | 1902947 | 52630838 ~ 52809711 (-) |
| G1307901 | NA | other | upstream | 54183 | 54766972 ~ 54768422 (-) |
| LOC110490757 | LOC106576193 | other | upstream | 705534 | 55417169 ~ 55438953 (-) |
| G1308831 | NA | other | upstream | 843443 | 55556232 ~ 55556574 (-) |
| G1308906 | NA | other | upstream | 1033496 | 55746285 ~ 55747753 (-) |
