Gene
RNA
| Item | Value |
|---|---|
| gene id | G1308107 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 55048488 ~ 55048883 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1492282 | True | 396 | lncRNA | 0.49 | 1 | 55048488 | 55048883 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110490334 | LOC106609296 | coding | upstream | 8679 | 55027671 ~ 55039809 (+) |
| LOC118938895 | NA | coding | upstream | 17571 | 55023526 ~ 55030917 (+) |
| LOC118938814 | NA | coding | upstream | 30097 | 55016905 ~ 55018391 (+) |
| LOC110490330 | LOC106576173 | coding | upstream | 649060 | 54383635 ~ 54399850 (+) |
| LOC110490325 | LOC106576169 | coding | upstream | 766701 | 54267330 ~ 54281787 (+) |
| LOC100272211 | socs2 | coding | downstream | 7969 | 55056852 ~ 55063742 (+) |
| LOC110490753 | LOC106609289 | coding | downstream | 63717 | 55112600 ~ 55137177 (+) |
| LOC110490339 | LOC106576184 | coding | downstream | 108823 | 55157706 ~ 55170847 (+) |
| LOC110490340 | pahx | coding | downstream | 169709 | 55218592 ~ 55224435 (+) |
| LOC110490342 | NA | coding | downstream | 191113 | 55239996 ~ 55243832 (+) |
| G1308102 | NA | non-coding | upstream | 4298 | 55042052 ~ 55044190 (+) |
| G1308059 | NA | non-coding | upstream | 59412 | 54969458 ~ 54989076 (+) |
| G1308005 | LOC106576205 | non-coding | upstream | 163505 | 54883809 ~ 54884983 (+) |
| G1308004 | NA | non-coding | upstream | 164881 | 54880803 ~ 54883607 (+) |
| G1308108 | NA | non-coding | downstream | 2740 | 55051623 ~ 55051868 (+) |
| G1308155 | NA | non-coding | downstream | 74518 | 55123401 ~ 55123859 (+) |
| G1308220 | NA | non-coding | downstream | 176001 | 55224884 ~ 55225220 (+) |
| G1308227 | NA | non-coding | downstream | 192131 | 55241014 ~ 55242480 (+) |
| LOC110490314 | LOC106576157 | other | upstream | 1158097 | 53875911 ~ 53890829 (+) |
| G1306708 | NA | other | upstream | 1465136 | 53580541 ~ 53583352 (+) |
| sox5 | LOC106576150 | other | upstream | 1673076 | 53352462 ~ 53471763 (+) |
| G1305302 | NA | other | upstream | 2535438 | 52512629 ~ 52513050 (+) |
| G1304886 | NA | other | upstream | 3133478 | 51914597 ~ 51915010 (+) |
| G1308238 | NA | other | downstream | 214075 | 55262958 ~ 55278451 (+) |
| G1308299 | LOC106576208 | other | downstream | 299153 | 55348036 ~ 55349205 (+) |
| LOC110490357 | LOC106609270 | other | downstream | 521135 | 55569924 ~ 55583925 (+) |
| G1309147 | NA | other | downstream | 967565 | 56016448 ~ 56016948 (+) |
