Gene
RNA
| Item | Value |
|---|---|
| gene id | G1308593 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 55050107 ~ 55050321 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1492892 | True | 215 | lncRNA | 0.36 | 1 | 55050107 | 55050321 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110490333 | LOC106576174 | coding | downstream | 33076 | 54969443 ~ 55017031 (-) |
| LOC110490751 | LOC106609299 | coding | downstream | 85959 | 54879640 ~ 54964148 (-) |
| LOC110490331 | LOC106576204 | coding | downstream | 450229 | 54597626 ~ 54599878 (-) |
| LOC110490332 | LOC106609300 | coding | downstream | 631011 | 54411303 ~ 54419096 (-) |
| LOC110490329 | LOC106609303 | coding | downstream | 669261 | 54374625 ~ 54380846 (-) |
| LOC110490754 | NA | coding | upstream | 87598 | 55136560 ~ 55147893 (-) |
| LOC110490337 | LOC106609287 | coding | upstream | 98439 | 55148760 ~ 55155353 (-) |
| LOC110490338 | LOC106576183 | coding | upstream | 120596 | 55170917 ~ 55217377 (-) |
| LOC110490755 | mcm10 | coding | upstream | 178583 | 55228904 ~ 55235465 (-) |
| LOC110490341 | optn | coding | upstream | 186333 | 55236654 ~ 55251104 (-) |
| G1308592 | NA | non-coding | downstream | 4121 | 55045762 ~ 55045986 (-) |
| G1308578 | NA | non-coding | downstream | 14643 | 55027742 ~ 55035464 (-) |
| G1308517 | NA | non-coding | downstream | 173891 | 54875988 ~ 54876216 (-) |
| G1308516 | NA | non-coding | downstream | 174510 | 54875396 ~ 54875597 (-) |
| G1307996 | NA | non-coding | downstream | 185699 | 54864150 ~ 54864408 (-) |
| G1308608 | NA | non-coding | upstream | 22271 | 55072592 ~ 55072811 (-) |
| G1308637 | NA | non-coding | upstream | 105600 | 55155921 ~ 55156228 (-) |
| G1308681 | NA | non-coding | upstream | 185190 | 55235511 ~ 55235761 (-) |
| G1308682 | NA | non-coding | upstream | 185618 | 55235939 ~ 55236208 (-) |
| G1307901 | NA | other | downstream | 281685 | 54766972 ~ 54768422 (-) |
| G1307473 | NA | other | downstream | 899567 | 54150044 ~ 54150540 (-) |
| G1307309 | NA | other | downstream | 1127979 | 53899310 ~ 53922128 (-) |
| efcab6 | efcab6 | other | downstream | 1292759 | 53756479 ~ 53786697 (-) |
| G1306232 | LOC106576137 | other | downstream | 1987827 | 53054849 ~ 53062280 (-) |
| LOC110490757 | LOC106576193 | other | upstream | 368002 | 55417169 ~ 55438953 (-) |
| G1308831 | NA | other | upstream | 505911 | 55556232 ~ 55556574 (-) |
| G1308906 | NA | other | upstream | 695964 | 55746285 ~ 55747753 (-) |
| G1309187 | NA | other | upstream | 1004170 | 56054491 ~ 56055064 (-) |
